Gene BamMC406_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1202 
Symbol 
ID6178139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1329437 
End bp1330357 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID641680958 
Producthypothetical protein 
Protein accessionYP_001807909 
Protein GI172060257 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGC GGACAAGTAT CGAGTTCGTG GCTGGCGGCC GCGGAGAACA TTGCCGTGGC 
TGGCTGTACG AACCTCGCGG GACGGGCCCG TTTCCTGTCA TCGTGATGGG ACACGGGCTG
GGCGGAATCA AGGAAATGCG GCTCGACGCC TATGCGCAAC GCTTTTGCGC GGAGGGCTAC
GCGTGCCTCG TGTTCGACTA TCGACATTTC GGTGCGAGCG ACGGGTCCCC TCGCCAATTG
CTCGATATCG ATCGTCAACT GGAGGACTGG TCCGGTGCGA TCGCTTTTGC ACGCAGGCAC
AGCAATCTCC GGCCGGATCA GGTGGTCCTG TGGGGAACAT CCTTCGGCGG CGGTCACGTG
ATTCTCTCCG CAGCACGCGA CCGGACCATT GCCGCTGCCA TCGCGCAATG CCCGTTCACG
GACGGGGTCG CGTCGTTGTT CGCATTGAAC TGGCGTAGCG CGCTCAAGGT TACCGCGCTC
GCTCTATGCG ATGTACTGCT ATCCCTCGTC GGCAGGGCAC CGGTGATGGT GCCGACGGCG
GGTCCGCCCG GTTCTGCCGC GTTGATGACT GCACCGGATG CCCTGGATGG CTATCTCGCG
CTTGTCCCTG ACGGCACTGC ATTTCGCAAT CAGGTCACAG CACGCTTCGG CCTGAACATT
GTTCGGCACC GCCCCGGTCG CAAAGCAGGC GACATTTTCT GTCCGATTCT GTTTTGCGTT
TGCGAAGCCG ACTCCGTCGC TCCGGCGGGG CCGACGAAAC GGTATGCCAG GCGCGCTCCC
AAAGGGGAAG TGCGCGCGTA TCAGGCAGGC CACTTCGACA TCTATGTGGG CAAGGACTTC
GAACAGGTGG TCGCCGACCA GCTGGCATTC CTCCACCGTC ACGTTCCAAC GAAGCAAGGA
GGCGCGCATG TCGACTTATA A
 
Protein sequence
MAGRTSIEFV AGGRGEHCRG WLYEPRGTGP FPVIVMGHGL GGIKEMRLDA YAQRFCAEGY 
ACLVFDYRHF GASDGSPRQL LDIDRQLEDW SGAIAFARRH SNLRPDQVVL WGTSFGGGHV
ILSAARDRTI AAAIAQCPFT DGVASLFALN WRSALKVTAL ALCDVLLSLV GRAPVMVPTA
GPPGSAALMT APDALDGYLA LVPDGTAFRN QVTARFGLNI VRHRPGRKAG DIFCPILFCV
CEADSVAPAG PTKRYARRAP KGEVRAYQAG HFDIYVGKDF EQVVADQLAF LHRHVPTKQG
GAHVDL