Gene BamMC406_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1188 
SymbolglmM 
ID6178518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1312890 
End bp1314245 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content71% 
IMG OID641680944 
Productphosphoglucosamine mutase 
Protein accessionYP_001807895 
Protein GI172060243 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.282955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTC GATATTTCGG CACGGACGGC ATTCGGGGCA CGGTAGGCGA GGCGCCCATC 
ACGCCTGATT TCGTGTTGCG TCTCGGCTAT GCGGCCGGCA AGGTACTGGC CGGCACGGCC
GACGTCGCGG CCGGTGCGCG TCCGACGGTG CTGATCGGCA AGGACACGCG CGTGTCGGGC
TACATGCTCG AGGCCGCACT CGAGGCCGGG TTCTCGGCGG CCGGCGTCGA CGTGATGCTG
GCCGGCCCGA TGCCGACGCC GGGCGTCGCA TACCTGACGC GCGCGCTGCG TCTGTCGGCC
GGCGTCGTGA TCAGCGCATC GCACAACCCG TATCAGGACA ACGGCATCAA GTTCTTCTCC
GCGGACGGCA ACAAGCTGCC CGACGAGACC GAAGCCGCGA TCGAAGCGTG GCTCGACAAG
CCGCTCGAAT GCGCATCGTC GGACCGGCTG GGCAAGGCGC GCCGCCTGGA GGACGCCGCC
GGCCGCTACA TCGAGTTCTG CAAGAGCACG TTCCCGGCCG CGTACGACCT GCGCGGGCTG
AAGCTCGTGA TCGACTGCGC GCACGGCGCC GCGTACCAGA TCGCGCCGCA CGTGTTCCAC
GAACTCGGCG CGGACGTGAT CCCGATCGGC GTCGCGCCGA ACGGCTTCAA CATCAACGAT
GGCGTCGGCG CGACCGCGCC CGACGCGCTC GTGCGCGCGG TGCGTGCGAA CCATGCGGAT
CTCGGGATCG CGCTCGACGG CGATGCGGAC CGCCTGCAGG TCGTCGATTC GACGGGCCGG
CTGTACAACG GCGACGAGCT GCTCTACGTG CTCGTGAAGG ACCGCATCGC GACGGCCGGC
AAGGTCGACG GCGCGGTCGG CACGCTGATG ACGAACCTCG CGGTCGAGGT CGCGTTGCAG
CGCGAGGGCG TGCCGTTCGT GCGCGCGGCG GTCGGCGACC GCTACGTGCT CGAACAGTTG
CGCGAACGCG GCTGGCAGCT CGGCGCGGAA GGCTCGGGCC ACATCCTGTC GCTCGACCGC
CATTCGACCG GCGACGGCAT CGTGTCGGCG CTGCTCGTGC TCGCCGCGCT CAAGCGCAGC
GACCGCACGC TCGCGCAGAT GCTGGACGGC GTCACGCTGT TCCCGCAGAA GCTGATCAAC
GTGCGGATGA AGCCGGGCGC GGACTGGAAG GGCAGCGCGT CGATTCGCGC GGCCATCGAC
GCGGCCGAAG GCGCGCTCGC CGGCAGCGGC CGCGTGCTGA TCCGCGCGTC GGGCACCGAG
CCCGTGCTGC GCGTGATGGT GGAGGCGCAG CAGGCGGCCG ACGCGACCCG CCACGCGGAA
GCGATCGCCG ACGCGGTGCG GATCGCGACG AGCTGA
 
Protein sequence
MGRRYFGTDG IRGTVGEAPI TPDFVLRLGY AAGKVLAGTA DVAAGARPTV LIGKDTRVSG 
YMLEAALEAG FSAAGVDVML AGPMPTPGVA YLTRALRLSA GVVISASHNP YQDNGIKFFS
ADGNKLPDET EAAIEAWLDK PLECASSDRL GKARRLEDAA GRYIEFCKST FPAAYDLRGL
KLVIDCAHGA AYQIAPHVFH ELGADVIPIG VAPNGFNIND GVGATAPDAL VRAVRANHAD
LGIALDGDAD RLQVVDSTGR LYNGDELLYV LVKDRIATAG KVDGAVGTLM TNLAVEVALQ
REGVPFVRAA VGDRYVLEQL RERGWQLGAE GSGHILSLDR HSTGDGIVSA LLVLAALKRS
DRTLAQMLDG VTLFPQKLIN VRMKPGADWK GSASIRAAID AAEGALAGSG RVLIRASGTE
PVLRVMVEAQ QAADATRHAE AIADAVRIAT S