| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1185 |
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| Symbol | |
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| ID | 6178641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1309158 |
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| End bp | 1309820 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680941 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_001807892 |
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| Protein GI | 172060240 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.164756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAA ACCGCTTCAA CCAGCACTGG CTGCACGACC ACATCAACGA CCCGTACGTC
AAAATGGCGC AGCGGGAGGG CTATCGCGCG CGCGCCGCGT ACAAGCTGAA GGAAATCGAC
GAGCAGGACA AGCTGATCCG TCCGGGCCAG GTGATCGTCG ACCTCGGCGC GACGCCGGGC
AGCTGGAGCC AGTATGCCCG CAACAAGCTC GCGCAGGGCA AGAAGCGCGA CACGCAACGC
GAAGGCGGCA TCGACGGCAC GATCATCGCG CTCGACCTGC TGCCGATGGA GCCGATCGCC
GACGTCCACT TCATCCAGGG CGATTTCCGC GAGGACGACG TCCTCCGGCA GCTCGAAGAT
GTTCTCGAAG GTCGCGCGGT GGACCTTGTT ATTTCCGACA TGGCCCCCAA CCTCTCCGGC
GTAGCCTCGG CGGACGCAGC ACGCATCGAG CATCTGTGCG ATCTGGCGCT CGAATTCGCG
CAGAACCATC TGAAGCCGGA TGGTGCACTG CTCGTGAAAT GCTTTCACGG CAGCGGCTAC
AGCCAGATCG TCGAGAAGTT CAAGCAGCAG TTTAAGGTGG TCGCGCCCCG CAAGCCGAAG
GCGTCGCGCG ACAAATCGTC CGAAACATTC ATTTTGGGCC GGCAGCTGAA GCAACCGCGG
TGA
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| Protein sequence | MAKNRFNQHW LHDHINDPYV KMAQREGYRA RAAYKLKEID EQDKLIRPGQ VIVDLGATPG
SWSQYARNKL AQGKKRDTQR EGGIDGTIIA LDLLPMEPIA DVHFIQGDFR EDDVLRQLED
VLEGRAVDLV ISDMAPNLSG VASADAARIE HLCDLALEFA QNHLKPDGAL LVKCFHGSGY
SQIVEKFKQQ FKVVAPRKPK ASRDKSSETF ILGRQLKQPR
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