| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1183 |
|---|
| Symbol | |
|---|
| ID | 6178763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1307923 |
|---|
| End bp | 1308381 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641680939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001807890 |
|---|
| Protein GI | 172060238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.226731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATC GCGTGTTCCG TCTGCTGTCG GCCGTGTGGG TCGGCAGCCT GCTGACGATC
GGGTATGCGG TCGCACCTGT GTTGTTCAAG ACGCTGGAGC GGATGACGGC CGGTTCGGTC
GCCGCCCAGC TGTTTCGCAT CGAGGCGATC CTCGGTGTCG TGTGCGGCGT GCTGCTGCTC
GCGCTGTCGA ATCAGCAGGT GCGGCGCGGC AGCGGCGATT ATCGTCGCGT GCGCTGGATC
GTCGCGGCGA TGGTCGCGTG CGTGCTGGTC GGGTATTTTG CGCTGCAGCC GTTCATGAAC
GCGCTGCGCG TGGCCGCGAT GGAAGCGGGC ACCGATATCG CGAACTCGCC TTACGCGAGC
CGCTTCGGGA TGCTGCACGG CGTCTCGAGC CTGTTCTATC TCGTCGAGAG CGTGCTGGGG
CTGATGCTGA TCTGGCGTCT GCCGGCGCAA GACTCCTGA
|
|---|
| Protein sequence | MPHRVFRLLS AVWVGSLLTI GYAVAPVLFK TLERMTAGSV AAQLFRIEAI LGVVCGVLLL
ALSNQQVRRG SGDYRRVRWI VAAMVACVLV GYFALQPFMN ALRVAAMEAG TDIANSPYAS
RFGMLHGVSS LFYLVESVLG LMLIWRLPAQ DS
|
|---|
| |