| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1180 |
|---|
| Symbol | |
|---|
| ID | 6178824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1303327 |
|---|
| End bp | 1303998 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641680936 |
|---|
| Product | leucine export protein LeuE |
|---|
| Protein accession | YP_001807887 |
|---|
| Protein GI | 172060235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.467386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCC ACGCACTCGG CATCACGGAT ATCTGGACCT ACGTGTTCGG CGTGATCTTC
ATCATCCTGC TGCCGGGGCC GAACTCGATG TACGTGCTGT CGCTCGCCGC GCAGCGCGGC
GTGAAGGCCG GCTATCGCGC GGCCTGCGGC GTGTTCGTCG GCGATACGGT GCTGATGGTG
CTGTCCGCCG CGGGCGTCGC GTCGCTGCTG AAGGCGAATC CGCTGCTGTT CTCCGTCGTC
AAGTACGGCG GCGCAGCGTA TCTGCTGTAC ATCGGCGCCG GGATGCTGCG CGGCGCGTGG
CGCAAGCTGC GCGCACGCGC CGATGCGCCG GCCGACGCGC CGCTCGCGGT CGACGGCGAG
CGGTCTTTCG ACCAGCCGTT CCGCAAGGCG CTGATCGTGA GCCTCCTGAA TCCAAAGGCG
ATCCTGTTCT TCATCTCGTT CTTCATCCAG TTCGTCGACC CGGCATTCCC GCATCCCGCG
CTGTCGTTCG TCGTGCTCGG GGCGATCGCG CAATGCGCGA GCTTCCTGTA CCTGAGCACG
CTGATCTTCG CGGGCGCGCG GCTCGCCGAG CATTTCCGCC GCCGCCGCAA GCTCGCGGCG
GGCGCGGCGA GCAGCGTGGG CGGCCTGTTC ATCGGTTTCT CGGTGAAGCT CGCGCTCGCC
ACCATGAGTT GA
|
|---|
| Protein sequence | MFGHALGITD IWTYVFGVIF IILLPGPNSM YVLSLAAQRG VKAGYRAACG VFVGDTVLMV
LSAAGVASLL KANPLLFSVV KYGGAAYLLY IGAGMLRGAW RKLRARADAP ADAPLAVDGE
RSFDQPFRKA LIVSLLNPKA ILFFISFFIQ FVDPAFPHPA LSFVVLGAIA QCASFLYLST
LIFAGARLAE HFRRRRKLAA GAASSVGGLF IGFSVKLALA TMS
|
|---|
| |