| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1177 |
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| Symbol | |
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| ID | 6178847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1298799 |
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| End bp | 1300388 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680933 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001807884 |
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| Protein GI | 172060232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000111267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0154135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTA TATTGAGTGC GATGGTGGTC CTGCTGCTCG CCGCTTGTGC GAGCCAGGCT
CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA CCTACCTCCG TAAATCAGCC
ACTGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CAGTGCGGAC
TCCGATCTCT GGGGCCGCAT CCGTCGCGGC TTCCAGATGC CCGACCTGCA GAGCGACCTC
GTCGACATGC AGACGACGTG GTACACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG
CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAACTCG AGGCGCGCCA CATGCCGACC
GAGCTCGCGC TGCTGCCGTT CATCGAATCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG
AAGGCGGCCG GCATGTGGCA GTTCATGCCG GGCACGGGCC GCACGTACAA CCTGAAGCGC
AACATGTGGC AGGACGAGCG CCGCGACGTG CTCGCGTCGA CGAGCGCCGC GCTCGACTAT
CTGTCGCGCC TGCATGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC CTACAACTGG
GGCGAGGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGCCT GCCGACCGAC
TACCAGAGCC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG
AAAAACATCA TCGCAAGCCC GCAGCAGTAC GGCCTCGCGC TGCCGGACAT CCCGAACCAC
CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC
GCGAACCTGT CGCTCGACGA ATTCCGCTCG CTGAACCCGT CGTTCTCGAA GCCGGTGATC
CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ATGCAGCGGC GTTCGAGAAG
AACCTGAAGG CGCACAACGG CCAGCTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGC
GCGCGTCCGG CCGCGATCGC CGAGAAGATC GGTGTCGACG CCGATACGCT GATGTCGATC
AACAAGATTC CGGCCGGCAT GCGCCTGAAA CCGGGTTCGA CGATCGTCGT GCCGCGTGGC
GACGACGACG ACGAGGACAT CAGCGCGGAC GTCGCCGAAA ATGGCGTGCT CGCGATGGAG
CCGGACGTGC CCGACACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCC
GCACTCGCCG GCCGCTACGG CGTGTCGGTC GGCCAGCTGA AGGCATGGAA CCGCACGCAT
CGCGATATGG TGATGCCGGG CCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTGCGGTG
CCGGCCGAGC CGGGTCCGGA GCGGATCGCG ACGTCGGCGG CCGGCGCGCA TATCGAGCGC
GCGAGCCTGT CCGTCGGCGG CAAGTCGCGT GGCGCGAAGC ACGCTGCCGC GAAGCCGGCG
GCCCGCGCGG CGAAGGCGGC CCCCGCGAGG GCGGCCCCCG CGAAGGCGGC GCCGGCCAAG
GCTGCTGCCA GCAAGAGCAA GAAGAAGTAA
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| Protein sequence | MRLILSAMVV LLLAACASQA PVANNAADSQ ATSTYLRKSA TAKETVDVDK QSVGDLTSAD
SDLWGRIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT
ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY
LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQSLRMPNET RNYVPKLQAV
KNIIASPQQY GLALPDIPNH PYFVTVTTSR DIDVAVAAKL ANLSLDEFRS LNPSFSKPVI
LGATEPQILL PFDNAAAFEK NLKAHNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSI
NKIPAGMRLK PGSTIVVPRG DDDDEDISAD VAENGVLAME PDVPDTRKML IRVRRKQSMA
ALAGRYGVSV GQLKAWNRTH RDMVMPGQAL VLHVPVGRAV PAEPGPERIA TSAAGAHIER
ASLSVGGKSR GAKHAAAKPA ARAAKAAPAR AAPAKAAPAK AAASKSKKK
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