Gene BamMC406_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1176 
Symbol 
ID6178925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1297826 
End bp1298647 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content69% 
IMG OID641680932 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_001807883 
Protein GI172060231 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000239023 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0635677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC TGGAATACGT GCCGGTGCCG GCATTCGAAG ACAACTACAT CTGGCTCGTG 
TCGGACGGCC GCGATGCGAT CGCCGTCGAT CCGGGTGAAG CCGCGCCGGT ACGCCGTGTT
CTTGCGGAAC GCGGCTGGCG GTTGACCGCT ATTTTACTCA CGCACCACCA CGCCGACCAT
GTCGGCGGTG TCGCCGCACT GCGAGATAGC CAACCGGACG ATGCGCCGCT CGTGGTTTAC
GGCCCCGCGG CCGAGGCGAT CGGCGTGGTC ACGCGGTCGC TCGCGGGCGG CGATCGCGTG
ACGCTCGACG CACCGGCGCT CGCGTTCGAC GTGCTCGACG TGCCCGGTCA TACGCGCGGC
CACATCGCGT ATTTTCAGGC GGCCGGCGTA GGCGGGGCCG GCCAAGGCGC GGCCACGCCG
CACGTGTTCT GCGGCGACAC GCTGTTCTCG TGCGGCTGCG GCCGCCTGTT CGAAGGCACG
CCCGCGCAGA TGCTCGCATC GCTCGACGCG CTCGCGGCGC TGCCCGGCGA CACGCGCGTG
CATTGCGCAC ACGAATACAC GCTGTCGAAC ATCCGCTTCG CGCTCGCGTG CGAACCGGGC
AATGCGGCGC TCGCCGCCTG GCGCGACGAC GCGCAGGCGC TGCGCGCGCG CGGCGTGCCG
ACGCTGCCCA CTACGATCGC GCACGAACGT GCGGTCAACC CGTTCATGCG CGCGGACAGC
GCGGCGATCC ATGCGACGCT CGAGGCCGAG CTGCACGAAA GGGTGCCGGA TCGTCTGGCG
GCATTCACGC TGATGCGCGA GTGGAAAAAT CGTTTCCGAT GA
 
Protein sequence
MNELEYVPVP AFEDNYIWLV SDGRDAIAVD PGEAAPVRRV LAERGWRLTA ILLTHHHADH 
VGGVAALRDS QPDDAPLVVY GPAAEAIGVV TRSLAGGDRV TLDAPALAFD VLDVPGHTRG
HIAYFQAAGV GGAGQGAATP HVFCGDTLFS CGCGRLFEGT PAQMLASLDA LAALPGDTRV
HCAHEYTLSN IRFALACEPG NAALAAWRDD AQALRARGVP TLPTTIAHER AVNPFMRADS
AAIHATLEAE LHERVPDRLA AFTLMREWKN RFR