Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1176 |
Symbol | |
ID | 6178925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1297826 |
End bp | 1298647 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680932 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_001807883 |
Protein GI | 172060231 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000239023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0635677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC TGGAATACGT GCCGGTGCCG GCATTCGAAG ACAACTACAT CTGGCTCGTG TCGGACGGCC GCGATGCGAT CGCCGTCGAT CCGGGTGAAG CCGCGCCGGT ACGCCGTGTT CTTGCGGAAC GCGGCTGGCG GTTGACCGCT ATTTTACTCA CGCACCACCA CGCCGACCAT GTCGGCGGTG TCGCCGCACT GCGAGATAGC CAACCGGACG ATGCGCCGCT CGTGGTTTAC GGCCCCGCGG CCGAGGCGAT CGGCGTGGTC ACGCGGTCGC TCGCGGGCGG CGATCGCGTG ACGCTCGACG CACCGGCGCT CGCGTTCGAC GTGCTCGACG TGCCCGGTCA TACGCGCGGC CACATCGCGT ATTTTCAGGC GGCCGGCGTA GGCGGGGCCG GCCAAGGCGC GGCCACGCCG CACGTGTTCT GCGGCGACAC GCTGTTCTCG TGCGGCTGCG GCCGCCTGTT CGAAGGCACG CCCGCGCAGA TGCTCGCATC GCTCGACGCG CTCGCGGCGC TGCCCGGCGA CACGCGCGTG CATTGCGCAC ACGAATACAC GCTGTCGAAC ATCCGCTTCG CGCTCGCGTG CGAACCGGGC AATGCGGCGC TCGCCGCCTG GCGCGACGAC GCGCAGGCGC TGCGCGCGCG CGGCGTGCCG ACGCTGCCCA CTACGATCGC GCACGAACGT GCGGTCAACC CGTTCATGCG CGCGGACAGC GCGGCGATCC ATGCGACGCT CGAGGCCGAG CTGCACGAAA GGGTGCCGGA TCGTCTGGCG GCATTCACGC TGATGCGCGA GTGGAAAAAT CGTTTCCGAT GA
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Protein sequence | MNELEYVPVP AFEDNYIWLV SDGRDAIAVD PGEAAPVRRV LAERGWRLTA ILLTHHHADH VGGVAALRDS QPDDAPLVVY GPAAEAIGVV TRSLAGGDRV TLDAPALAFD VLDVPGHTRG HIAYFQAAGV GGAGQGAATP HVFCGDTLFS CGCGRLFEGT PAQMLASLDA LAALPGDTRV HCAHEYTLSN IRFALACEPG NAALAAWRDD AQALRARGVP TLPTTIAHER AVNPFMRADS AAIHATLEAE LHERVPDRLA AFTLMREWKN RFR
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