Gene BamMC406_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1172 
Symbol 
ID6177059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1295397 
End bp1295729 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content71% 
IMG OID641680928 
Producthypothetical protein 
Protein accessionYP_001807879 
Protein GI172060227 
COG category[S] Function unknown 
COG ID[COG1742] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0240568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.121257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TGATGAAGAT CGCGGCGCTG TTCGCCGTCA CCGCGCTGGC CGAAATCGTC 
GGCTGCTACC TGCCGTGGCT CGTGCTGAAG GGCGGGCGGC CCGTGTGGCT GCTCGTGCCG
GCCGCGTTGT CGCTCGCGCT GTTCGCGTGG CTGTTGACCC TGCACCCGAG CGCCGCGGGG
CGCACGTACG CGGCGTACGG CGGCGTGTAT ATCGCGGTGG CGCTTATCTG GCTGCGGGTG
GTCGACGGCG TCGCGCTGAC GCGCTGGGAT GCGGCGGGCG CGGTGCTCGC GCTCGGCGGG
ATGGCTGTCA TCGCGCTGCA GCCGCGCGCG TAA
 
Protein sequence
MTELMKIAAL FAVTALAEIV GCYLPWLVLK GGRPVWLLVP AALSLALFAW LLTLHPSAAG 
RTYAAYGGVY IAVALIWLRV VDGVALTRWD AAGAVLALGG MAVIALQPRA