| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1171 |
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| Symbol | |
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| ID | 6176105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1293376 |
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| End bp | 1294851 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680927 |
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| Product | general substrate transporter |
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| Protein accession | YP_001807878 |
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| Protein GI | 172060226 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0956509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0980355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGCAA CACACGTCAG CCCGACCGCT GCTTCTTCCT CCGCTTCGTC CGGGGCCCCG
CTCGCCGCGG ACGACATTAC CGTCGTCGAC CAGGGCCTGC TCAAGCGCGC CGTCAGCGCG
ATGGCCATCG GCAATGCGAT GGAATGGTTC GACTTCGGCG TCTACAGCTA TATCGCCGTC
ACGCTCGGCA AGGTGTTCTT CCCGTCGAGC AGCCCGTCCG CGCAGCTGCT CGCGACCTTC
GGCACGTTCG CGGCCGCGTT CCTCGTGCGC CCGCTCGGCG GCATGGTGTT CGGCCCGCTC
GGCGACCGCA TCGGCCGCCA GCGCGTGCTC GCCGCGACGA TGATCATGAT GGCCGTCGGC
ACCTTCGCGA TCGGCCTGAT CCCCAGCTAC GCGTCGATCG GCATCATGGC GCCCGTGCTG
CTGCTCGTCG CCCGCCTCGT GCAGGGCTTC TCGACCGGCG GCGAATACGG CGGCGCCGCC
ACCTTCATCG CCGAATTCTC GACCGACAAG CGCCGCGGCT TCATGGGCAG CTTCCTCGAG
TTCGGCACGC TGATCGGCTA TGTGATGGGG GCTGGCGTGG TCGCGCTGCT CACCGCGTCG
CTGTCGCAGG AAGCGCTGCT GTCGTGGGGC TGGCGCGTGC CGTTCCTGAT CGCGGGCCCG
CTCGGCCTGA TCGGCCTGTA CATCCGGATG AAGCTCGAGG AGACGCCGGC GTTCAAGCGC
CAGGCCGAGG AGCGCGAAGC GCAGGACAAG GCCGTGCCGA AGACGCGCTT TCGCGAAACG
CTGCTGCGCA ACTGGCGCGC GCTGCTGCTC TGCGTCGGCC TCGTGCTGAT CTTCAACGTG
ACCGACTACA TGGTGCTGTC GTACCTGCCG AGCTTCATGT CGTCGACGCT GCACTTCGAC
GAATCGCACA GCCTCGTGCT GGTGCTGATC GTGATGGTGC TGATGATGCC GCTGACGCTC
GCCGCCGGCC GCCTGTCGGA CAAGATCGGC CGCAAGCCCG TGATGCTGGC CGGCTGCGTC
GGCCTGCTGG TGCTGTCGAT CCCGTCGATG ATGCTGATCC ATGCGGGCAC CACCGCGTCG
GTGTTCGGCG GGCTGCTGAT CCTCGGCGTG CTGCTGTCGT GCTTCACCGG CGTGATGCCG
TCGGCACTGC CGGCGCTGTT CCCGACCGAG ATCCGCTACG GCGCGCTCGC GATCGGCTTC
AACGTGTCGG TGTCGCTCTT CGGCGGCACG ACGCCGCTCG TCACCGCGTG GCTCGTCGAC
GTGACCCACA ACCTGATGAT GCCCGCGTAC TACATGATGG GCGCCGCCGT GATCGGCATC
GTGTCGGTCG TCGCGCTCGC CGAAACCGCG CGCCAGCCGC TCAAGGGCTC GCCGCCGGCC
GTCGCGTCGC ATCGTGAAGC CCACCAGCTG GTGCGCCAGC TGCGCGAGGA AGAGGACACG
GAGATCTACG GCGTCGTGTC GGCCGCCCGT GCCTGA
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| Protein sequence | MTATHVSPTA ASSSASSGAP LAADDITVVD QGLLKRAVSA MAIGNAMEWF DFGVYSYIAV
TLGKVFFPSS SPSAQLLATF GTFAAAFLVR PLGGMVFGPL GDRIGRQRVL AATMIMMAVG
TFAIGLIPSY ASIGIMAPVL LLVARLVQGF STGGEYGGAA TFIAEFSTDK RRGFMGSFLE
FGTLIGYVMG AGVVALLTAS LSQEALLSWG WRVPFLIAGP LGLIGLYIRM KLEETPAFKR
QAEEREAQDK AVPKTRFRET LLRNWRALLL CVGLVLIFNV TDYMVLSYLP SFMSSTLHFD
ESHSLVLVLI VMVLMMPLTL AAGRLSDKIG RKPVMLAGCV GLLVLSIPSM MLIHAGTTAS
VFGGLLILGV LLSCFTGVMP SALPALFPTE IRYGALAIGF NVSVSLFGGT TPLVTAWLVD
VTHNLMMPAY YMMGAAVIGI VSVVALAETA RQPLKGSPPA VASHREAHQL VRQLREEEDT
EIYGVVSAAR A
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