Gene BamMC406_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1166 
Symbol 
ID6176121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1289326 
End bp1289847 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content72% 
IMG OID641680922 
Producthypothetical protein 
Protein accessionYP_001807873 
Protein GI172060221 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.150864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.112926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCG CCATGAGACC AGCCGCCTTC CTCCTCGCCG CGCTCGGCTG CGCGGCGAGC 
GCCCACGCCA GCCCGATTCC GTCCGACGCC GCGTCGGTCG GCACGTACTT TTCGTATGAC
AATGCGGCGG CCGACGCGAC CGTCGACCTG ATCGGGCAAG CGCAGCGCCG CGTGCTGCTG
GCCGGCTATG CGTACGTGCC GCCCGCGGTC GCGGCCGCGC TGCGTACGGC GCGCTCGCGC
GGGATCGAAG TGCGGGTCGT GCTGGTGCGT TCGTCGCGTG CCGGCAAGTA CAGCGGCGCA
GGCTATCTGA AATCGGCCGG CATCGATGTC GCGATCGACT CGCGCCACGG CGATCCGGCG
CCGCGCTTCG TGATCGTCGA CGACAGCGTC GCGCTGACGA CGCTGTCCGA CGATGCCGCC
GCGCGCGCGG AAACGGTGAA CGTGTTCCAG CGCGCGCCGG AGCTCGCGCA ATCGTACGCG
CAGTCGTTCT GGCGGCTGTA CCGGCAGGCC GGCGGCCTCT GA
 
Protein sequence
MAPAMRPAAF LLAALGCAAS AHASPIPSDA ASVGTYFSYD NAAADATVDL IGQAQRRVLL 
AGYAYVPPAV AAALRTARSR GIEVRVVLVR SSRAGKYSGA GYLKSAGIDV AIDSRHGDPA
PRFVIVDDSV ALTTLSDDAA ARAETVNVFQ RAPELAQSYA QSFWRLYRQA GGL