| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1165 |
|---|
| Symbol | |
|---|
| ID | 6176665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1288178 |
|---|
| End bp | 1289110 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641680921 |
|---|
| Product | acyl-carrier-protein S-malonyltransferase |
|---|
| Protein accession | YP_001807872 |
|---|
| Protein GI | 172060220 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.033586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.190387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTG CGATCCTGTG TTCGGGGCAA GGCGCGCAGC GCGCGGACAT GTTCGAGCTG
ACCGGCGCGG TGCCGCAGGC CGATGCGCTG TTCGCGCACG CCGGCCGGCT CCTCGGCGAC
GATCCGCGCA ACTGGGTCCG GCACGCCGAA CCGGACGCGC TGCACGAGAA CCGCGCCGCG
CAGCTCCTCT GCACGCTGCA GGCGCTCGCG GCGGCCGCGT TGCTCGATAC TGTGTGGCCG
CGGCGTCGCT GTGTCGCGGG ATACAGCGTC GGCGAAGTCG CGTCGTGGAG CGTCGCAGGG
ATGATCGATC CGCACGACAC GCTGGATCTT GCCGATGCAC GCGCGCGCGC AATGGACGCC
GCGAGCGGCG GCGATGAGCG GATGGCGTTC GTGCGCGGGT TGACGCGCGC GCGGCTCGCG
CAGCTCTGCG ACGGACGCGA TGCCGCGATC GCGATCGCCA ATCCCGGCGA CGCGTTCGTC
GTGGCCGGGC GGCAGGCCGA CGTCGCCGCG GTGGCCGACG ACGCCGCACG CGACGGGGCG
CTGCGCGTGG CACCCGTGTG CGTGCGGATC GCGTCGCACA CGCGCCGGCT CGCGGCGGCG
GTCCCCGCGT TTCGCGCATC GCTGGCCGCC GTGAACGTGC GCCGGCCACC GCCCGGGACG
CGACTGTTTT CGGGGATCGA CGGCGCGTCG GTGCTCGATG TCGGCGCGGG GCTCGACAAG
CTCGCGCGGC AGATCGCGGA GCCGGTGGAG TGGGCGGCTT GCCTGGCCGC ATGCGTCGAG
GCCGGCGCGA CCGCGTTTCT CGAACTCGGC CCCGGTCGCG CACTGGCCGA GATGGCGGGC
GGCGCGTACC CGGCGCTGCC GGCGCGCAGC GTCGCGGATT TCCGTTCCGT CGACGGTATC
GCGAGCTGGC TCGCGCGCGT CGCGGTCGGC TGA
|
|---|
| Protein sequence | MTLAILCSGQ GAQRADMFEL TGAVPQADAL FAHAGRLLGD DPRNWVRHAE PDALHENRAA
QLLCTLQALA AAALLDTVWP RRRCVAGYSV GEVASWSVAG MIDPHDTLDL ADARARAMDA
ASGGDERMAF VRGLTRARLA QLCDGRDAAI AIANPGDAFV VAGRQADVAA VADDAARDGA
LRVAPVCVRI ASHTRRLAAA VPAFRASLAA VNVRRPPPGT RLFSGIDGAS VLDVGAGLDK
LARQIAEPVE WAACLAACVE AGATAFLELG PGRALAEMAG GAYPALPARS VADFRSVDGI
ASWLARVAVG
|
|---|
| |