| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1162 |
|---|
| Symbol | |
|---|
| ID | 6177047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1285956 |
|---|
| End bp | 1286663 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641680918 |
|---|
| Product | malonate decarboxylase, gamma subunit |
|---|
| Protein accession | YP_001807869 |
|---|
| Protein GI | 172060217 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.166916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG ATGAAGTCCT GACCTCGCTG CTTCCCAAAG GCCATTCGAT TACGCGCAGC
GGCGGCCTGC TGACGGGCCA CGCGCAGCTG ACCGGCACGC GCGTCGACGT GATTGGCGTG
GCCGACCGCT TGCCATTCGG CATCGACGAA GCGCTGACGC TCGCGTCACA CGTGCTCGAC
ACGATCGAGC GCGGCGGCGA CACGCCGATT CTCGTGCTCG TCGACAGCGA CAGCCAGCGC
ATGAGCAAGC GCGACGAACT GCTCGGCCTG AACGAAGGGC TGTCGCATCT CGCGAAATGC
CTGATGCAGG CGGAGCTCGC CGGGCACCGG ACGATCGGCG TGCTGTACGG CCATACGGCC
GCGGGTGCGT TCATCGCGAC CGCGCTCGCG ACGCGTACGC TGCTCGCGGT GCCGGGCGCC
GAGCCGGAGG TGATGGACCT GCCGTCGATG TCGCGCGTGA CGAAGCTGCC GATCGACGTG
CTGAAGGAGA TGGCGCGCTC GACGCCGGTG TTCGCGCCGG GGCTCGACAA TCTCGTGAAG
ATGGGCGCCG TCGACGCCGT GCTCGACCCG GCCCGCGCGC TCGACGCGCA GGTCGGCGAA
TGGCTCGGCA GGCCGGCCGA GCGCGGCGAT GGTCGTGCGG CGCGCGGCCG GCCGGTCGCG
GCCGACGTCG CGCGTCGCGT CGAGGCACTC GCGCGTGCCG CACGCTGA
|
|---|
| Protein sequence | MTLDEVLTSL LPKGHSITRS GGLLTGHAQL TGTRVDVIGV ADRLPFGIDE ALTLASHVLD
TIERGGDTPI LVLVDSDSQR MSKRDELLGL NEGLSHLAKC LMQAELAGHR TIGVLYGHTA
AGAFIATALA TRTLLAVPGA EPEVMDLPSM SRVTKLPIDV LKEMARSTPV FAPGLDNLVK
MGAVDAVLDP ARALDAQVGE WLGRPAERGD GRAARGRPVA ADVARRVEAL ARAAR
|
|---|
| |