| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1159 |
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| Symbol | |
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| ID | 6176533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1282937 |
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| End bp | 1284583 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680915 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_001807866 |
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| Protein GI | 172060214 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.491071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.20265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGAT GGAATCACGC GCGGCAGGCG CGCGATGCAC GCCTCGCGGC CGGCGCGGCG
TACGCGCAGG GCAAGCGGGT CGATGCGCGC GACACCGTCG CGTTGCTCGA AGCGGTGCTG
CGGCCCGGCG ACCGCGTTTG CCTCGAAGGC GACAACCAGA AACAGGCCGA CCTGCTCGCG
ACGGCGCTCG CCGACGTCGA CAACGCGAAG ATCCACGACC TGCACATGGT GCAGTCGGGC
GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGGA TCGCGAAGCG TCTCGACTTC
GCGTATTCGG GCCCGCAGTC GCAGCGGATC GCGAAGCTGC TGTTCGGCGG CAAGATCGCG
CTCGGCGCGG TGCACACGTA TCTCGAGCTG TTCGCTCGCT ACTTCATCGA CCTCACGCCG
CAGGTCGCGC TGATCGCGGC GGTCAGTGCC GATCGTGACG GCAACCTCTA CACCGGCCCG
AACACGGAAG ACACGCCGAC CGTCGTCGAG GCCACCGCGT TCAAGGACGG CATCGTGATC
GCGCAGGTCG ACCGCATCGT CGACAAGGTG CCGCGCGTCG ACATTCCCGG CGACCGCGTG
CATTTCGTCG TCGAGGCCGG CCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGACCCG
GCCGCGATCA CCGAAACGCA GATCCTGACC GCGATGCTCG CGATCAAGGG CATCTACGAA
CCATACGGGA TCAAGCGCCT GAACCACGGG ATCGGCTTCA ACACGGCCGC GATCGAGCTG
CTGCTGCCGA CCTACGGCGC GAAGCTCGGG TTGAAGGGCA AGGTCTGCAC GCACTGGGCG
CTCAATCCGC ACCCGACGCT GATCCCCGCG ATCGAGTCGG GCTGGGTCGA GCAGATTCAC
TGCTTCGGTT CCGAAGTGGG GATGGACGAC TACATCCGCG CGCGCTCCGA CGTGTGGTTC
ACGGGCCCCG ACGGGTCGCT GCGCTCGAAC CGCGCGTTCT GCCAGACCGC GGGACTCTAT
GCGTGCGACA TGTTCATCGG CTCGACGCTG CAGATCGACC TGGCGGGCCA TTCGTCGACG
GTCACGGCCG AGCGGATCGC CGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC
GGCCGGCGTC ATCCGAGCGA GCCGTGGCTG AAGGCCGGCG CGCAAGCCGA CCCCGACACG
CCGGCGGCGC TCAGGCGCGG CCGCAAGCTG GTCGTGCAGA TCGGCGAGAC GTTCGGCGAC
AAGAACGTGC CGATGTTCGT CGAGAAGCTC GACGCGCTGA AGCTCGCCGA CAAGCTGCAG
CTCGACCTCG CGCCGATCAT GGTCTACGGC GACGACGTCA CGCACATCGT CACCGAGGAA
GGGATCGCGA ACCTGCTGAT GTGCCGCGAC AAGGATGAGC GCGAGCACGC GATCCGCGGC
GTGGCCGGGT ATACCGAGGT CGGCCGCGGC CGCGACCGCC GGATGGTCGA GCGGCTGCGC
GAGCGCGGCG TGATCCGGCG TCCGGAGGAT CTCGGCATCG ATCCGCTCGA TGCCGACCGC
CGCTGGCTTG CCGCGCGTTC GATCAAGGAT CTCGTGCACT GGTCGGGCGG CCTCTATGCG
CCGCCGGCCC GGTTCCGCAA CTGGTGA
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| Protein sequence | MTGWNHARQA RDARLAAGAA YAQGKRVDAR DTVALLEAVL RPGDRVCLEG DNQKQADLLA
TALADVDNAK IHDLHMVQSG VVLPEHLDVF ERGIAKRLDF AYSGPQSQRI AKLLFGGKIA
LGAVHTYLEL FARYFIDLTP QVALIAAVSA DRDGNLYTGP NTEDTPTVVE ATAFKDGIVI
AQVDRIVDKV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AAITETQILT AMLAIKGIYE
PYGIKRLNHG IGFNTAAIEL LLPTYGAKLG LKGKVCTHWA LNPHPTLIPA IESGWVEQIH
CFGSEVGMDD YIRARSDVWF TGPDGSLRSN RAFCQTAGLY ACDMFIGSTL QIDLAGHSST
VTAERIAGFG GAPNMGSDAR GRRHPSEPWL KAGAQADPDT PAALRRGRKL VVQIGETFGD
KNVPMFVEKL DALKLADKLQ LDLAPIMVYG DDVTHIVTEE GIANLLMCRD KDEREHAIRG
VAGYTEVGRG RDRRMVERLR ERGVIRRPED LGIDPLDADR RWLAARSIKD LVHWSGGLYA
PPARFRNW
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