| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1156 |
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| Symbol | |
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| ID | 6176547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1280416 |
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| End bp | 1281264 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680912 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001807863 |
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| Protein GI | 172060211 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.243733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCT TACCGCCCGA GTTGCTGCGC AGCTTCGTCG CCGTCGCCCA GTCCGGCAGT
TTCACCGCCG CGTCCGAGCG CGTGAGCCTG TCGCAGTCGA CCGTCAGCCA GCACATCCGC
CGCCTCGAGG AGCTGCTCGA CCGGCCGCTG TTCGAGCGCG ACACGCGCAA CGTGCACCTG
TCGCAGCACG GCGACGCGCT GTTCCGCTAC GCGGTGCGCA TTCTCGAACT GATGGACGAG
GCCGTCACGT CGGTGTGCGG GCCGCCGCTG TCGGGCAAGG TGCGGCTCGC GATGTCGGAG
GATTTCGCGA GCGCGCACCT GACGGCCGCA CTCGCGAGCT TCGTGCAGCG TAATCCGGAC
GTCGAGCTCG CGATCTCGAC GGGGTTGTCG GGCGATCTGT TCGATGCACT CGACGAAGGC
CGCCACGATC TGGTGTTCGC GAAGCGCGTC GCGGGCAGCC GGCGCGGCCG CGTGATCCGC
AGCGAACCGC TGTACTGGTG CACCGGCCCC GATTCGCGGA TCACCGGCCA CGAGACCGTG
CTGCCGCTCG CACTGCATCC GGAGCCGAGC GTGTCGCGCC GCCGCGTGCT CGAGTCGCTC
GAGGCAGTCG GCCGCCCTTA CCGGATCGCC GTGGTGAGCA GCAGCATCGC GGTGCTGCGC
GCGGCCGCGA GCGCGGGGCT CGGGGTCAGC GCGTTCGCCG GCTACGTGAT TCCCGCCGGG
CTCGCACGGC TCGACGCGGG GCTGCCCGAA CTCGGCGAAC TCGAATACGT GATCGACCGG
CCCGCGGCTG CGTCACGCTC GACGCTCGCG CTCGAGGCGA CGCTGATCGC GGCGGCCGCC
GAACTGTAG
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| Protein sequence | MRPLPPELLR SFVAVAQSGS FTAASERVSL SQSTVSQHIR RLEELLDRPL FERDTRNVHL
SQHGDALFRY AVRILELMDE AVTSVCGPPL SGKVRLAMSE DFASAHLTAA LASFVQRNPD
VELAISTGLS GDLFDALDEG RHDLVFAKRV AGSRRGRVIR SEPLYWCTGP DSRITGHETV
LPLALHPEPS VSRRRVLESL EAVGRPYRIA VVSSSIAVLR AAASAGLGVS AFAGYVIPAG
LARLDAGLPE LGELEYVIDR PAAASRSTLA LEATLIAAAA EL
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