Gene BamMC406_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1153 
Symbol 
ID6176099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1278373 
End bp1278789 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content71% 
IMG OID641680909 
Productheat shock protein Hsp20 
Protein accessionYP_001807860 
Protein GI172060208 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.405022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA GCCAGAGCCA GAACGTGACC GAACGCCGGA ACGGTGCCAT CCACGCGGCA 
GCCGCGGAAG CCGCACGCCG GCCCGCGCTC ACGCCGGCCG TCGATATCGT CGAGGACGCG
CGGCGCGTCA CGCTGCGCGC CGACCTGCCC GGCGTGCCGC GCGAGAACCT CGACGTGAAG
GTGCACGACA ACACGCTGAC GATCGAAGCC GACACGCGCA TCGACACGCC GGCCGACCTG
CGCGTGCGCC ATGCCGAAGT CCGCGCGCCG CGCTTCGTGC GCACGTTCGT GCTGAGCCCC
GATCTCGACA CGTCGAAAAT CGATGCGAGC CTGCGCGACG GCGTGCTCAC GCTGACGATT
CCGCGCCGCG AGGAAACGCG CCCGCGCCGC ATCGACGTGA CGGCCGGCAA CGCGTAA
 
Protein sequence
MNTSQSQNVT ERRNGAIHAA AAEAARRPAL TPAVDIVEDA RRVTLRADLP GVPRENLDVK 
VHDNTLTIEA DTRIDTPADL RVRHAEVRAP RFVRTFVLSP DLDTSKIDAS LRDGVLTLTI
PRREETRPRR IDVTAGNA