Gene BamMC406_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1143 
Symbol 
ID6177020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1267257 
End bp1268567 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content69% 
IMG OID641680899 
Productmajor facilitator transporter 
Protein accessionYP_001807850 
Protein GI172060198 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.287074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT CCCTTCCTTC CGCCCGCCAG CCGGCGCGTG CCGCGACGGC CGCGTTCGTC 
GGCACGATGA TCGAGTGGTA CGACTTCTAC ATCTACGCGA CCGCCGCCGC GCTCGTGTTC
GGCGAACTCT ATTTCCCGTC GCATGACCGC TTCGTCAGCA CGATGGCGTC GTTCGCGACG
TTCGCGGTCG GCTTCTTCGC GCGCCCGCTC GGCGGCATCG TGTTCGGCCA TCTCGGCGAC
CGCATCGGCC GCAAGAAGGC GCTGATGACG ACGCTGATGA TGATGGGCGT CGCGACCGTG
TGCGTCGGGC TGCTGCCCGA CTATTCGCAG GTCGGCATGC TCGCGCCGGT GCTGCTGATC
GTGCTGCGCG TCGTGCAGGG GATCGCCGTC GGCGGGGAAT GGGGCGGCGC GGTGCTGATG
GCGGGCGAAC ACGCGCCGCA GGGCCGCCGC ACGTTCTTCG CGTCGTTCGC GCAGCTTGGC
AGTCCGGCCG GGCTGATCCT GTCGCTGATC GCGTTTCGCG CGGTCACGTC GATGGACAAG
GCCGATTTCC TCGCATGGGG CTGGCGCCTG CCGTTTCTCG CGAGCTCGGT GCTGCTCGTC
GTCGGCATCC TGATCCGGCT CGGTGTGAAC GAGTCGCCGG AATTCGCGCG CGTGAAGGAG
GCGAACCGCA CCGTGAAGCT GCCGGTCGCC GAAGTGCTGC GCTCCGCGTC GGGGCTCGTG
CTGCTCTGCA TCGGCGCGAA CACGATCGGG ATCGCGGGCG TCTATTTCAC CAACACGTTC
ATGATCGCGT ACACCACGCA GTACGTCGGC GTGTCGCGCT CGCTGATCCT CGACAGCCTG
TTCGCGGTCG CGATCATCCA GTTCATCGCG CAGCCGCTCG CCGCTTGGAT CGCCGAGCGT
ATCGGCGGCG CGCGTTTCCT GAAGATCGCC GCGCTGCTCG CGATGCTGTC GCCGTACCCG
ATGTTCATGC TCGTGCAGGG CGGCACGTCC GGGTCGCTCG TCGCCGGCAT CGCGCTTGCG
GTCGTGTGCA TGGCCGGCTT CTATTCGGTG ATCGCCGGCT TCGTGAGCGG CGTGTTTCCC
GCGCACGTGC GCTATTCGGC GATCTCGCTC GCGTACCAGG TTTGCGGCGC GATCGCTGGC
GGCCTGACGC CGCTCGTCGG CACCTGGCTC GCGCATCGCT TCGCGGGCCA GTGGTGGCCG
CTCGCGGTGT TCTACACGTG TCTCGCCGGC ATCTCGCTGC TTTGCATCGT CGCGCTCGAC
GCGCGACGCG CGGGGCGGCC GGCCGCGGCC GAAGCGCTCG GCTCGCACTG A
 
Protein sequence
MTQSLPSARQ PARAATAAFV GTMIEWYDFY IYATAAALVF GELYFPSHDR FVSTMASFAT 
FAVGFFARPL GGIVFGHLGD RIGRKKALMT TLMMMGVATV CVGLLPDYSQ VGMLAPVLLI
VLRVVQGIAV GGEWGGAVLM AGEHAPQGRR TFFASFAQLG SPAGLILSLI AFRAVTSMDK
ADFLAWGWRL PFLASSVLLV VGILIRLGVN ESPEFARVKE ANRTVKLPVA EVLRSASGLV
LLCIGANTIG IAGVYFTNTF MIAYTTQYVG VSRSLILDSL FAVAIIQFIA QPLAAWIAER
IGGARFLKIA ALLAMLSPYP MFMLVQGGTS GSLVAGIALA VVCMAGFYSV IAGFVSGVFP
AHVRYSAISL AYQVCGAIAG GLTPLVGTWL AHRFAGQWWP LAVFYTCLAG ISLLCIVALD
ARRAGRPAAA EALGSH