Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1143 |
Symbol | |
ID | 6177020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1267257 |
End bp | 1268567 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680899 |
Product | major facilitator transporter |
Protein accession | YP_001807850 |
Protein GI | 172060198 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.287074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT CCCTTCCTTC CGCCCGCCAG CCGGCGCGTG CCGCGACGGC CGCGTTCGTC GGCACGATGA TCGAGTGGTA CGACTTCTAC ATCTACGCGA CCGCCGCCGC GCTCGTGTTC GGCGAACTCT ATTTCCCGTC GCATGACCGC TTCGTCAGCA CGATGGCGTC GTTCGCGACG TTCGCGGTCG GCTTCTTCGC GCGCCCGCTC GGCGGCATCG TGTTCGGCCA TCTCGGCGAC CGCATCGGCC GCAAGAAGGC GCTGATGACG ACGCTGATGA TGATGGGCGT CGCGACCGTG TGCGTCGGGC TGCTGCCCGA CTATTCGCAG GTCGGCATGC TCGCGCCGGT GCTGCTGATC GTGCTGCGCG TCGTGCAGGG GATCGCCGTC GGCGGGGAAT GGGGCGGCGC GGTGCTGATG GCGGGCGAAC ACGCGCCGCA GGGCCGCCGC ACGTTCTTCG CGTCGTTCGC GCAGCTTGGC AGTCCGGCCG GGCTGATCCT GTCGCTGATC GCGTTTCGCG CGGTCACGTC GATGGACAAG GCCGATTTCC TCGCATGGGG CTGGCGCCTG CCGTTTCTCG CGAGCTCGGT GCTGCTCGTC GTCGGCATCC TGATCCGGCT CGGTGTGAAC GAGTCGCCGG AATTCGCGCG CGTGAAGGAG GCGAACCGCA CCGTGAAGCT GCCGGTCGCC GAAGTGCTGC GCTCCGCGTC GGGGCTCGTG CTGCTCTGCA TCGGCGCGAA CACGATCGGG ATCGCGGGCG TCTATTTCAC CAACACGTTC ATGATCGCGT ACACCACGCA GTACGTCGGC GTGTCGCGCT CGCTGATCCT CGACAGCCTG TTCGCGGTCG CGATCATCCA GTTCATCGCG CAGCCGCTCG CCGCTTGGAT CGCCGAGCGT ATCGGCGGCG CGCGTTTCCT GAAGATCGCC GCGCTGCTCG CGATGCTGTC GCCGTACCCG ATGTTCATGC TCGTGCAGGG CGGCACGTCC GGGTCGCTCG TCGCCGGCAT CGCGCTTGCG GTCGTGTGCA TGGCCGGCTT CTATTCGGTG ATCGCCGGCT TCGTGAGCGG CGTGTTTCCC GCGCACGTGC GCTATTCGGC GATCTCGCTC GCGTACCAGG TTTGCGGCGC GATCGCTGGC GGCCTGACGC CGCTCGTCGG CACCTGGCTC GCGCATCGCT TCGCGGGCCA GTGGTGGCCG CTCGCGGTGT TCTACACGTG TCTCGCCGGC ATCTCGCTGC TTTGCATCGT CGCGCTCGAC GCGCGACGCG CGGGGCGGCC GGCCGCGGCC GAAGCGCTCG GCTCGCACTG A
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Protein sequence | MTQSLPSARQ PARAATAAFV GTMIEWYDFY IYATAAALVF GELYFPSHDR FVSTMASFAT FAVGFFARPL GGIVFGHLGD RIGRKKALMT TLMMMGVATV CVGLLPDYSQ VGMLAPVLLI VLRVVQGIAV GGEWGGAVLM AGEHAPQGRR TFFASFAQLG SPAGLILSLI AFRAVTSMDK ADFLAWGWRL PFLASSVLLV VGILIRLGVN ESPEFARVKE ANRTVKLPVA EVLRSASGLV LLCIGANTIG IAGVYFTNTF MIAYTTQYVG VSRSLILDSL FAVAIIQFIA QPLAAWIAER IGGARFLKIA ALLAMLSPYP MFMLVQGGTS GSLVAGIALA VVCMAGFYSV IAGFVSGVFP AHVRYSAISL AYQVCGAIAG GLTPLVGTWL AHRFAGQWWP LAVFYTCLAG ISLLCIVALD ARRAGRPAAA EALGSH
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