| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1142 |
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| Symbol | |
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| ID | 6177325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1266114 |
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| End bp | 1267070 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680898 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001807849 |
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| Protein GI | 172060197 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.26532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG ACCTCACGCC CTTCCTCAAC GACCGCCTCG ACTGGAACCT GCTGCGCACC
TATCTGGTGA TCATGCAGGA ACGCAGCGTG AGCCGGGCGG CCGCGCGCCT GCACGTGACG
CAGCCGGCCG TGAGCCAGGC GCTGCGGCGG CTGGAAGACA CACTGGAGCG AAAGCTGATC
GAGCGGCGCG GCGCGCACTT CGCGCCCACT CCCGCGGGCG AAGCCGTGTA CCGGATCGCG
AGCGACATCT ACGGCGGCGT GTCGCGGCTC GAAACGGAAC TCGACGACAG CACGGCCGAC
CTCACCGGTT CGATCCGGCT GCTGACGGTG AGCCGCATCG AGTCGCCCGT CTACGACGCA
TTCCTCGCCG ACTTCCATCG CGCGTATCCG CGCATCGATC TGCAGATCGA AGTGATGCGC
TCGTCGGACA TCCTGTCGTC GCTGCTGCAG AAGACGGCCA CCGCCGGGCT CGGGCTGTGC
CGCACGCCGC ACGACAAGCT GGAGATGCGC TGCTTCCTGC GCCAGCGCTA CGCGATCTAC
TGCGGCCGCC ATCACCGGCT GTTCGGGCAA ACGCAGTTGC GAATGGAGGA TCTGCTCGCG
GAGAACTTCG TGTCGTTCAC GAGCGACCAG ATCGGCGACA GCCTGTCGCC GCTCACCGTG
TTCCGCGACC AGAAGGGTTT CACCGGGCGC ATCGTCGCGT CGTCGCCGAG CCTCGAGGAA
GTGCGGCGGC TGATCTTCGC CGGTTACGGA ATTGGCTGCC TGCCCGAGCA CATCGTGCGC
GACGACATCG CACAGCAACG GCTGTGGCGG CTGCCGCCCG ACGACGGCCT CGTCGACGTC
GACGTGTTCC TGCTGTGGCA TCGCGACCGC AAGATGAACG CGGCCGAGCA CGCGTTCCTC
GACGCGATGG AGCGCTGCAT GCAGCAGCAC TCGCTCGCGG AACGGCTGGG GATGTAG
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| Protein sequence | MRADLTPFLN DRLDWNLLRT YLVIMQERSV SRAAARLHVT QPAVSQALRR LEDTLERKLI
ERRGAHFAPT PAGEAVYRIA SDIYGGVSRL ETELDDSTAD LTGSIRLLTV SRIESPVYDA
FLADFHRAYP RIDLQIEVMR SSDILSSLLQ KTATAGLGLC RTPHDKLEMR CFLRQRYAIY
CGRHHRLFGQ TQLRMEDLLA ENFVSFTSDQ IGDSLSPLTV FRDQKGFTGR IVASSPSLEE
VRRLIFAGYG IGCLPEHIVR DDIAQQRLWR LPPDDGLVDV DVFLLWHRDR KMNAAEHAFL
DAMERCMQQH SLAERLGM
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