| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1141 |
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| Symbol | |
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| ID | 6176791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1265057 |
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| End bp | 1266040 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680897 |
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| Product | porin |
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| Protein accession | YP_001807848 |
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| Protein GI | 172060196 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.259275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGAT CGGGCGCCGC GCTCGCGCAG GACGGCGTCA CGCTGTACGG CGTGATCGAC
GAATTCGCGC AGTACGTGAA TACCGGCAAC GGCTATACCG CAGCGATCGG CTCGGGTGGA
CAGTGGGGCA GCCGCTTCGG GATGAAGGGC GGCGAGGATC TCGGCGGCGG CCAGAAGGTC
GAGTTCGCGC TCGAGAACGG CTTCAACCCG AACGACGGTT CGCTCGCAAG TTCGGGCAGC
ATGTTCAATC GCCAGGCGTG GGTCGGCATC GCGGGGCAGT GGGGCAAGGT ACGCGCGGGC
CGCCAGAATT CGCCGCTGTT CAACGACCAG GGTGGGCAGG ATGCGTTCGG CGGCGTCACG
CAGGCGTCCG GCATGGACAA CCTGACCGTA TTCGCGTTCC GCACGAGCAA TACGCTGTCG
TACCAGAGCC CGGAGATCGG CGGCTTCCAG GGCGGGTTGT ATTTCGGGTT CGGCGATGCG
GGCGGCGTGC GCTCGGCGGG CTCCAGCCGG CAGTTCGACC TGACCTACGA GCACGGGCCG
TTCGCGGCGT TCGTCGCGGG GCAGTGGCTG AAGAGCACGA CCACGACCAC GACCGATCGC
ACGATCATGG CCGGCGCATC GTACGCGATC GGCAAGGCAA CCGTGTACGG CGGTTTTTCG
GCGGTGAAGT GGGCCGATCT CGGAATCGAT TCGCGCGTGT ACGGGTTGTC GCTCAAGTAT
CAGCTCAATC CGGCGAACTA TGTCGCGCTC GGCTATGCGT ATCTGCATGA CCAGACGTCG
CAAGGCAACA ACGCGGACCA GCTCGGGCTG ATGTACGAAT ACGACCTGTC GAAGCGCACG
AGCTTCTATG GCGCGCTGTC GTACCTGCGC AACCGCAACC AGGCCGGCTA CACGCTCGCG
GGCGCGGCGA ATCCCGGCCT GCCGCTCGCG TATCCGGGCG CGAATGCGCG CGGCGTGCAG
CTCGGCATCG TTCACCGCTT CTGA
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| Protein sequence | MGGSGAALAQ DGVTLYGVID EFAQYVNTGN GYTAAIGSGG QWGSRFGMKG GEDLGGGQKV
EFALENGFNP NDGSLASSGS MFNRQAWVGI AGQWGKVRAG RQNSPLFNDQ GGQDAFGGVT
QASGMDNLTV FAFRTSNTLS YQSPEIGGFQ GGLYFGFGDA GGVRSAGSSR QFDLTYEHGP
FAAFVAGQWL KSTTTTTTDR TIMAGASYAI GKATVYGGFS AVKWADLGID SRVYGLSLKY
QLNPANYVAL GYAYLHDQTS QGNNADQLGL MYEYDLSKRT SFYGALSYLR NRNQAGYTLA
GAANPGLPLA YPGANARGVQ LGIVHRF
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