Gene BamMC406_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1139 
Symbol 
ID6176086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1262304 
End bp1263086 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID641680895 
Producthypothetical protein 
Protein accessionYP_001807846 
Protein GI172060194 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.492379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTGC ACCCGCAAGA CTGTTTCGTC ATACCAACCG ATTGCACGAA CACGGCGTGC 
ACGCTGACCT ACGATGAAGA CATCGCGTCC ATCGTCTGCC GAACCGTGTG CACTCACTAC
CGCGCCCCCG ATGAAGACCC GGGCATCAGC GAGCTGAAGC TCGGCATCGG CGACCTGTTT
CGCCGCGATC CGTGGGAACC CGACGTGTAT CCCGATTACG CGGCGCCCAT CGCGCGTGCC
GACGGCGACG GCCTCGCGGT CGTCAGCGCG GTGTTCGGCT TCTGGCCGAA GTTCATGCAG
CCCGTGCGTC TCGACGAGAA CGGCCGCAAG CGAAAGAAGC TCGATACGGT GAACGCGCGC
GCGGAAACGG TCGGCTCGTC GCGGCTCTAC AGCACCGCCT GGCGCAACGG CCAGCGTTGC
CTGATTCCGG TGCGCTGGAT CTTCGAGCCG TGCTATGAGA CGGGCCGCAA CGTGTGGCAT
CGGATCGGCG TCGACGGCTG GCAGCCGTGC TGCGTCGCCG GTATCTGGCG CAGCTTCGTC
ACCGCCGACG GCCGCGAGCG AATCGGCATG ACGATGCTCA CGGTCAACGC CGACGATCAC
CCCGTGTTCG CGCGCATGCA TCGGCCCGGC GACGAGAAGC GGGGCGTCGT GATCCTGCGC
CGCGACGACT ACGACGCATG GCTCCACGCA CGCGACGTCG AGGCCGTGCG GCGCTTGCTG
ACACTCCTTC CCGCCGACGA CCTGGTGGCC GAGCCCGAGC AGGCGTCGCC CGCCGGCACC
TGA
 
Protein sequence
MHLHPQDCFV IPTDCTNTAC TLTYDEDIAS IVCRTVCTHY RAPDEDPGIS ELKLGIGDLF 
RRDPWEPDVY PDYAAPIARA DGDGLAVVSA VFGFWPKFMQ PVRLDENGRK RKKLDTVNAR
AETVGSSRLY STAWRNGQRC LIPVRWIFEP CYETGRNVWH RIGVDGWQPC CVAGIWRSFV
TADGRERIGM TMLTVNADDH PVFARMHRPG DEKRGVVILR RDDYDAWLHA RDVEAVRRLL
TLLPADDLVA EPEQASPAGT