| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1135 |
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| Symbol | |
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| ID | 6177660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1257427 |
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| End bp | 1258470 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680891 |
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| Product | transketolase central region |
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| Protein accession | YP_001807842 |
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| Protein GI | 172060190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.770864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.562943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAC AGGAAACGAC GACGGCATCG GCGCAGCCGA TGACGATGAT CCAGGCGCTG
CGCTCCGCGA TGGACGTGAT GCTCGAGCGC GACGGCGACG TGGTCGTGTT CGGGCAGGAC
GTCGGCTACT TCGGCGGCGT GTTCCGCTGC ACCGAAGGGC TGCAGGCCAA GTACGGCAAG
TCGCGCGTGT TCGATGCGCC GATCTCGGAA GGCGGGATCG TCGGCGCGGC GGTCGGGATG
GGCGCGTATG GATTGCGGCC GGTCTGCGAG ATCCAGTTCG CGGACTACTT CTACCCGGCG
TCCGACCAGA TCGTGTCGGA AGGCGCACGG CTGCGCTATC GCTCCGCGGG CCAGTTCACC
GCGCCGATGA CGATCCGGAT GCCGTGCGGC GGTGGCATCT ACGGCGGCCA GACGCACAGC
CAGAGCCCGG AGGCGATGTT CACGCAGGTC TGCGGGTTGC GCACGGTGAT GCCGTCGAAT
CCGTACGACG CGAAAGGGCT GCTGATTGCG TCGATCGAGA ACGACGATCC GGTGATCTTC
CTCGAGCCGA AACGGCTGTA CAACGGGCCG TTCGACGGCC ATCACGAGCG TCCGGTCACG
TCGTGGCTCA AGCATCCGGG CAGCGTGGTG CCGGACGGCT ATTACACGGT GCCGCTCGAT
ACGGCGGCCG TGGTGCGGCC CGGCAACGAC CTGACGGTGC TGACGTACGG CACGACCGTG
CACGTGTCGC TCGCCGCGGC CGAGGAGACC GGCATCGACG CGGAAGTGAT CGATCTGCGC
ACGCTGTGGC CGGTCGACCT CGACACGATC GTCGCGTCGG TGCGCAAGAC CGGCCGCTGC
GTGGTGGTGC ACGAAGCGAC GCGCACCTGC GGCTACGGCG CGGAACTGGT ATCGCTCGTC
CAGGAGCACT GCTTCTACCA TCTGGAAGCA CCGGTCGAGC GGACGACGGG CTGGGACACG
CCGTATCCGC ACGCGCAGGA ATGGGCGTAT TTCCCCGGCC CGGCCCGGGT TGGCGAAGCA
TTGCGACGCG TGATGGAGGC CTGA
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| Protein sequence | MAQQETTTAS AQPMTMIQAL RSAMDVMLER DGDVVVFGQD VGYFGGVFRC TEGLQAKYGK
SRVFDAPISE GGIVGAAVGM GAYGLRPVCE IQFADYFYPA SDQIVSEGAR LRYRSAGQFT
APMTIRMPCG GGIYGGQTHS QSPEAMFTQV CGLRTVMPSN PYDAKGLLIA SIENDDPVIF
LEPKRLYNGP FDGHHERPVT SWLKHPGSVV PDGYYTVPLD TAAVVRPGND LTVLTYGTTV
HVSLAAAEET GIDAEVIDLR TLWPVDLDTI VASVRKTGRC VVVHEATRTC GYGAELVSLV
QEHCFYHLEA PVERTTGWDT PYPHAQEWAY FPGPARVGEA LRRVMEA
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