Gene BamMC406_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1125 
Symbol 
ID6176072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1244261 
End bp1245505 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID641680881 
Productglycosyl transferase group 1 
Protein accessionYP_001807832 
Protein GI172060180 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.157828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA ATCGCGTGCT GATCGTGAAC GACTACGATG CCTTCGGCGG GGCCGAGCAG 
GTCTATCGGT TGTCGGTGGA GACGTTGCGG GAGATGCCCG ATGTCGTGGT CGAGAAATTC
GACAAGGGCG ATGTCGCGGA GGTCAGCCTG GCCGCCCATC CCGTATGGAA CATTCGTGCC
GCGCTGGCGC TGGACAGGAC GATTCAGCGG TTCATGCCGG ATCGCATCTG GGTCCACAAC
TATCACGGCT ACATGTCTTC GTCGATTCTC GGCGTAATCA GGCGAAACAG GCAGCGGTTC
GGCTACAGGA CCTATCTGAC CTGCCACGAC TACCACCTCG TGTTTCATAA CCCGCTGATG
CTCTATTACC CACGCGGGCG CGTGGTGCCG GTCGCGCTCG ATGATATCGG CACGCTGCGT
CCGCTGATGA CACGCTCGAG CCCGCGCGGC TTCGTCTACG ACACGCTCAG GAAAATGCAC
TGGCTGACCA TGGACCGGCT GACCGATCCG CGCAGCGCCT TCGATCTGTT CCTGTGCCCG
AGCGTGTTCA TGCGCGAAGC GCTGCGCCGG CGCGGCATCA CGAACAGCGT GTTCTTCCCC
AATCCCGTCG CGATTCCGGA ATGTCATCCA CGGCGCGCCG GCCGGCGCGA TTCAGGCCTG
CAACTCGCGT TCATCGGGCG AATTTCGGCG GAAAAGGGCA TCGGCCAGTT CCTCGAGCTG
CTGGCGGCCA CGCAATTTCA CGGCGTGCGG TGCATCACGC TGTTCGGCGA CGGTCCCGAC
AGACGCCGGC TGGAAAGCCA GTACGCTTCG CTGATCGACG CAGGACGTGT GTCGTTCGCA
GGCAGTCTGC CGCACGCCGA GCTGTTTCCG CGTGCGCGCG GACTCGACGC GCTGGTGCTC
CCGTCGATTT GCGGCGAGAA CGCGCCGCTG GTGATCGTCG AAGCGGCCGC GCTCGGCATG
CCGATCCTGG TTCATGATCT CGGCAGCATG TCGACCTTCG GTGACGAAAT CGGCAACAAG
ATCAAATATT CGTCGAACCC CGCCAGCCTC ACGGCAGCAC TCGATGCGCT CGCCGATCAT
CTCGCGAACG CGCAGCTGTC GTACGACGTG GGCTTGTACA CGAAGTCGCG TTACGCGTGC
GAGGTGATGC GTCACTTGTC GCTCGGCGAG CCGAACACCG CGCTGCTCCC CGAAGCGCAC
GATCCAGTCG CGAACGGAGC GCCCGCCCAT GTGCCGTCCC ATTGA
 
Protein sequence
MQNNRVLIVN DYDAFGGAEQ VYRLSVETLR EMPDVVVEKF DKGDVAEVSL AAHPVWNIRA 
ALALDRTIQR FMPDRIWVHN YHGYMSSSIL GVIRRNRQRF GYRTYLTCHD YHLVFHNPLM
LYYPRGRVVP VALDDIGTLR PLMTRSSPRG FVYDTLRKMH WLTMDRLTDP RSAFDLFLCP
SVFMREALRR RGITNSVFFP NPVAIPECHP RRAGRRDSGL QLAFIGRISA EKGIGQFLEL
LAATQFHGVR CITLFGDGPD RRRLESQYAS LIDAGRVSFA GSLPHAELFP RARGLDALVL
PSICGENAPL VIVEAAALGM PILVHDLGSM STFGDEIGNK IKYSSNPASL TAALDALADH
LANAQLSYDV GLYTKSRYAC EVMRHLSLGE PNTALLPEAH DPVANGAPAH VPSH