| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1123 |
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| Symbol | |
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| ID | 6178604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1241604 |
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| End bp | 1242932 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680879 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001807830 |
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| Protein GI | 172060178 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.801174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.617722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTACA TCACGCTCCT CGCGCTGCTT TTCAGCATCA CGAACTTCAT CCCGGTCAGT
GCGATCGGCT TCGCGCCGAT TTGCCTCTGC GCGTGGCGCT TGTTCGACCG GCGCTATCCG
CCGTTCGTGA CATGCTTGTC AGTCTTCGGG CTGTTGGCGT TGGGCTCGAC GCTGCTTTAC
GACCCGCAAG CGTTGCTGTC GTACGACTTC TACCGCCACG ACGGCAACTT CTTCGTGTCT
TATGCGCCGA TCCTTGCCGG TTGCCTGTAT TCGCACGAGC TGGATCTCGA CAAGGCGCTG
AGACGCTTCT TCGTGTTTGC CGTGCTCGCG AACCTGCCGC CCTATGCCGT CTATGTCGCG
CAAAACGGCC TGTTGGCGAT ATTCTCGAAC GCCAACGACT CGTTCGGCAG CTACTTCATT
GCCCGTAACG CCGCCGGCGG TTTCCTCGCG ATGCTGTTCT GTCTCGGCCT GTCCTGTTAC
GTGAAGCGCC ACGACAAGCT CGTGCTCGGG TTGCTGGTCC TCAACGCGAT GTTCGTGTTT
TCCACCTACA GTCGCGGATC GATGCTGGGG ATGGCGACCG CAATCGCGTA CCTGTTGCTG
GGCCGCAAGC GCTGGTTGGT GGCGGTGCTG ATGGCCGCGG CAGTGGCGTT CTCCTTCGGC
GCGGCCTGGA ACCACACGCA ATCGGCAGTC GACTACATGG CCCACGAGCA CACGGTACGC
GATGTGGACG CGAAAACGGC CAACGTGGAC GTGCGCTTCG GATGGCTGTG GCCGCGGGCA
TTGGCGTATT TCGAAGCAAG CCCGATCATC GGGATGGGTG TCGGGTCGTT CGACGACGAA
GTGCATGACG TCGTGAACTA TTTCGGTGTG GTCGGCCAGC CGCGGGACGT CACCGTGTTC
CATACCGATG CGCATGCACA CAATTCCTAC CTGCATATCG CCGCGGAGCT GGGCGTGATC
GGTCTCGCGC TGATGCTGGC CTTCTATTGG CATCTCGTCA AATGGGCAAT GGAAGGCGCC
GCCTCGACGC TGCCTGCGCG CCGCAGCAGT GTCGGCGCGT ATACGTTCGT CGAGTTGTCA
TCGGTGTGCC TGCTCGCGAT GGGCACGACG GAGCACCGCC TGACCACGCC GTCGAATGTC
CTGATTCTCG CGCTGGTCGT GTCGTTGCTG CTGTCCTGGC GCGTGCGGCG CGCGGGTGCG
GTGGCAAAAG TGGCGCGTCC CGCGACGCGC GGCGTGGCGC TTACGGCAGC GGCGTCACGA
CGAGATAGCC AAGACACGGG CACGGTTTGT CGTCAGCGCC GGGTCGCGGC TCCGGTACGT
AGAAGCTGA
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| Protein sequence | MVYITLLALL FSITNFIPVS AIGFAPICLC AWRLFDRRYP PFVTCLSVFG LLALGSTLLY
DPQALLSYDF YRHDGNFFVS YAPILAGCLY SHELDLDKAL RRFFVFAVLA NLPPYAVYVA
QNGLLAIFSN ANDSFGSYFI ARNAAGGFLA MLFCLGLSCY VKRHDKLVLG LLVLNAMFVF
STYSRGSMLG MATAIAYLLL GRKRWLVAVL MAAAVAFSFG AAWNHTQSAV DYMAHEHTVR
DVDAKTANVD VRFGWLWPRA LAYFEASPII GMGVGSFDDE VHDVVNYFGV VGQPRDVTVF
HTDAHAHNSY LHIAAELGVI GLALMLAFYW HLVKWAMEGA ASTLPARRSS VGAYTFVELS
SVCLLAMGTT EHRLTTPSNV LILALVVSLL LSWRVRRAGA VAKVARPATR GVALTAAASR
RDSQDTGTVC RQRRVAAPVR RS
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