| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1121 |
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| Symbol | |
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| ID | 6176229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1238139 |
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| End bp | 1239023 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641680877 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001807828 |
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| Protein GI | 172060176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGG GTAAAGCAAT GTCGAGAGAG ATCCTTTCGC GATGTGTGAT GATGTTCGGC
ATCGACCATA TGGTTCGCGT GTTGCTATGG CGCGATCGAG TGGCGATCCT GCTCTACCAC
GACCCCGATC CGGCGACGCT GGATCGACAC CTCACCTACC TGAAAACCAT CTGCGATCTC
GTGCCGCTCG ACGCACGCGG TTTGCCGGGG AACGGGCGTC CGCGCGCGGC CATCACGTTC
GACGACGGAC TGGCCGGGAA TGCCCGCCTG CTGCCGATCT TCATCAAGCA CAAGGTGCGG
CCGACGATTT TCCTGTGCAG CCGTATTGTC TGCCGAGCGC GCAGACACTG GTGGTTGCAT
CCAGCCGCGG AGCGGCTTGG CGTCGAGCGC CTGAAGCGAC TCGCGAACGA TCAACGCCTC
GCCGAGCTAC GTGTGCACGG CTTTGACCAG GATGGCGACG ACGAGCCGAC GGGGCTGAAC
CTGGAGCAGC TCGAAGCGAT GCGTCCATTC GTGGATTTTC AGGCGCATAC GCGCTTTCAC
CCGATACTGA CGCGCTGCGG CGATAGCGAA TGCAAAGAGG AAATCATCGA ATCCCGGCGT
GAAGTCGAGG CGTTGACCGG CACCCGTTGC GAACACTTCG CCTATCCGAA CGGCAATTAC
GGCAAGCGGG AAATCAATCT GCTGAAGGCG GCGGGGTACA AGAGTGCGCG AACCTGTGAC
GTCGGCTGGA ACGATCACCG TAGCGACGCG TTTCGTCTGA AAACCATCAT CATCGACGAT
CGCGCATCGC TCAGGTGGTT CATCTGCAAT TTGACGGGCA TCCCGCCGTT TCTGGGTTAT
CTGCGCAAGG GCGGCGGTTT GCGCGGGCAT TTTCCCCAGT TCTGA
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| Protein sequence | MISGKAMSRE ILSRCVMMFG IDHMVRVLLW RDRVAILLYH DPDPATLDRH LTYLKTICDL
VPLDARGLPG NGRPRAAITF DDGLAGNARL LPIFIKHKVR PTIFLCSRIV CRARRHWWLH
PAAERLGVER LKRLANDQRL AELRVHGFDQ DGDDEPTGLN LEQLEAMRPF VDFQAHTRFH
PILTRCGDSE CKEEIIESRR EVEALTGTRC EHFAYPNGNY GKREINLLKA AGYKSARTCD
VGWNDHRSDA FRLKTIIIDD RASLRWFICN LTGIPPFLGY LRKGGGLRGH FPQF
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