Gene BamMC406_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1120 
Symbol 
ID6177551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1236791 
End bp1238059 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID641680876 
Productputative oxidoreductase 
Protein accessionYP_001807827 
Protein GI172060175 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGA CTGACACGGT AATCATTGGC GCAGGTCCGT ACGGCTTGTC GCTCGCGACA 
CATCTGAAGG CCGCCGGCGT GCCGCATCAA ATCCTCGGTC AGCCGATGTG CGCGTGGCGA
AACTACATGC CGCCCGGCAT GCTCATGCGC TCGGAGGCAT TCGCTTCGAA TCTCTGTGCG
CCGCGACGCG GCTATACGCT GAAGGACTAT TGCCGGGTGA AGGGCATCCC GTATCAGCCG
GTGGGCATGA AGGTGACATT GGAAACCTTC GTCGACTACG GGCTTTGGTT TCAATCTGCC
CTGGCCGTCG AGACCCGGCC TGTCGAAGTC GTCGACCTGC GCCGCAGCGA CGATGGCTTC
AGCCTGAGCC TGAGCGACGG CAGCACGCTG GACGCGCGCA GGGTGGTGAT GGCGCTGGGC
CTCAAGGGAT TTGCCCACAC ACCGCCGGCG CTGCAGGGAT TGCCGGATAC CTACGTGTCG
CATTCCGAAA AGTACGGCAG CCTGACGTGG GCCGCTGGAC GGGACATCGT CATCGTCGGT
GGCGGGCAAT CGGCGCTCGG GCTGGCTGCA CTTCTGAACG AAGTGGGCGC AACCGTTCGC
GTGCTGGTGC GAGATCAGTC GGTGGACTGG AATCCGACGC CGGAAACCGA GCGCTCGTTC
GTGTCGAAAA TGCGGAGTCC GGACGCAGGC CTGGGCCGTG GCTGGCGAAC GCATGTGCTC
TGCGAATATC CGCGGGTCTT TCACGCGCTG AGCCCGCGAT TGCGCAAGCA TCTCATCGAA
CGATTGCATG GCCCGTCCGG CGCGTGGTGG CTGCATGATC GCGTCGTCGA CAAAATCCCG
ATCGCCGTCG GCACGGAAGT GCGAAGCGCG GCAATCGACG ACGACAAGGT GGCGCTGCGG
GTCGCGAACG GGAACGGAGA GTCGACCGTC ACGGCTTCGC ATGTCATTGT CGCCACCGGA
TTCAAGACCG ACATGACGCG GCACACGTTC ATTTCGAAAG AAATCATGGA GTCGATTTCG
CTCTTCAGCG GCGGGCCGGA GCTGACGAGC TACTTCGAGA CGACGGTGCG CGGACTTTAC
GTGATCGGCC CGGCTTCCGC GCAATCCTTT GGTCCGGTGA TGCGCTTCGT CTACGGGGCA
AAACACGCCG CTCCGCACGT GGCATCGCAC ATCGGCGACG CGCACCGAAG CGAGACGGCG
AAGATCGGAT GGCGCGGCGC GCCAGGCCAA CTCCTCGAGC CGACGAGCGA GCGAGACGGT
TCGTTATAG
 
Protein sequence
MPSTDTVIIG AGPYGLSLAT HLKAAGVPHQ ILGQPMCAWR NYMPPGMLMR SEAFASNLCA 
PRRGYTLKDY CRVKGIPYQP VGMKVTLETF VDYGLWFQSA LAVETRPVEV VDLRRSDDGF
SLSLSDGSTL DARRVVMALG LKGFAHTPPA LQGLPDTYVS HSEKYGSLTW AAGRDIVIVG
GGQSALGLAA LLNEVGATVR VLVRDQSVDW NPTPETERSF VSKMRSPDAG LGRGWRTHVL
CEYPRVFHAL SPRLRKHLIE RLHGPSGAWW LHDRVVDKIP IAVGTEVRSA AIDDDKVALR
VANGNGESTV TASHVIVATG FKTDMTRHTF ISKEIMESIS LFSGGPELTS YFETTVRGLY
VIGPASAQSF GPVMRFVYGA KHAAPHVASH IGDAHRSETA KIGWRGAPGQ LLEPTSERDG
SL