Gene BamMC406_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1119 
Symbol 
ID6176393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1235587 
End bp1236804 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID641680875 
ProductATP-grasp enzyme-like protein 
Protein accessionYP_001807826 
Protein GI172060174 
COG category[R] General function prediction only 
COG ID[COG3919] Predicted ATP-grasp enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACG CATACGATTC TGACCAGAAG GTCGCGGTTG TCGTGGTCGG CTGCTCGCTC 
AACGGGCTGG GCGTTGTCCG CTCGCTCGCC CGCGAGCGGG TTCCGATCGT CGCGGTGGAT
TGCAAACGAA TCGGGCCGGC CTTGTGGTCG CGCCATGTCC GCGGGCATTT GATCCGAAGC
TTCGTGGGGC GGAAGTTTGT CGACGACATG GCCCGTCTCG GCGCGATGTT CGAGCGTCCC
CCGGTGCTCC TGCTGACGGA CGAGGATGCC GTTCATTCCG TTTCCGAGAA CCGCGACGAG
CTGGCGAAAT GGTTCTGCTT CTGTCTACCC GAGGATCGCA ACGTCAAGCT CCTGAGCAGC
AAGTCGTCGT TTCATGAATT TGCGTGGCAG CACGGTTTCC CGGTCCCGCG CTCCGTCATT
CTGCAGACGC AGGCCGACCT CGGGCTGCTC GCCGAGCTGC GCTTTCCGTG CGTGCTGAAG
CCCGACGACA AACGCTACGT ACTGACGGGG AAGAAAGAGC GGGCGGTGCG CGTGCGGACT
TTGAGCGAGG CGCGTGAACA CGCGGTCGTC ATGCTCAGTT CACCGGGCGG CATCGTCGCG
CAGGAATGGA TCGAGGGGCC AGGCAGCAAT ATCCATTTCA CACTCTTCTA TCGCGGAGCG
GGCGGCGAAG TCGTCAGCGT GTTCACCGGC CGCAAGATCC TGAGCGATCC CCCCGACATC
GGCAATACGG CGATTTGCGT CGCCGCGGAT GAAGCGCGCG ACGTCCTCGA GCCAATGACG
CTGGACTTCG CGGAGCGTGC GGGCATGGTC GGCATGGGCA GCATGGAATA CAAATGGGAC
GACAACTACA AGGAATTCGT GATGATCGAG CCGACCGTCG GAAGGACGGA CTGGCAGGAG
GAAATCGCGA CGCTGTGCGG GGTCAATATT CCCGCGGCCG CGTATCGATA CGAACTCGGC
TTTCCGCCAT TGCCCGATCA AACGAATCAT GCAGCGGTCG CGTGGCGCGC GACCTTCCTC
GACCGGCCTC CGCCCCGCCT GACGGGTGCC GATACGAGGA TGATCGACGG CTACTTCCGA
TGGAACGATC CGTTGCCGGC ATTGCAGTTT TACTGCGCGA TCGGTCCTCT GCGCCGCGTA
GTCAGAGGAT GGCGGGAAAA AAAGCGTACG CGGATTGCAC GGCAAATACT CAGGGAGGCA
AAGAATGCCA TCGACTGA
 
Protein sequence
MSHAYDSDQK VAVVVVGCSL NGLGVVRSLA RERVPIVAVD CKRIGPALWS RHVRGHLIRS 
FVGRKFVDDM ARLGAMFERP PVLLLTDEDA VHSVSENRDE LAKWFCFCLP EDRNVKLLSS
KSSFHEFAWQ HGFPVPRSVI LQTQADLGLL AELRFPCVLK PDDKRYVLTG KKERAVRVRT
LSEAREHAVV MLSSPGGIVA QEWIEGPGSN IHFTLFYRGA GGEVVSVFTG RKILSDPPDI
GNTAICVAAD EARDVLEPMT LDFAERAGMV GMGSMEYKWD DNYKEFVMIE PTVGRTDWQE
EIATLCGVNI PAAAYRYELG FPPLPDQTNH AAVAWRATFL DRPPPRLTGA DTRMIDGYFR
WNDPLPALQF YCAIGPLRRV VRGWREKKRT RIARQILREA KNAID