| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1109 |
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| Symbol | |
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| ID | 6178068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1221815 |
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| End bp | 1223752 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680865 |
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| Product | hypothetical protein |
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| Protein accession | YP_001807816 |
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| Protein GI | 172060164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCG AACCGAACGC CGGGCGCCAG GCCGGATGCT TCGTACGCGG GTCTCCTGTC
AATCCCGTTC GTGATGAAGT GTCGAAGATG AATCCATTCG TATCACGGCG CGCTGTAGCG
CCGGCTTTGC TGTGCGCGCT TGTTTTGGTG CTGTCCGCGT GCGGGGGCGA CGATTCCGGC
GCACCCGCGA TCGTCGTGCA GGAGCAGCAG GGCGAGTCCG GAGAGCACGT GAAACCGGCG
CCGGAAATCG TCGCGGACGG TGTGGCGGTT TCCGATGAGC CGGGCGCGCC GCCCGATCCC
TCGTATCCGC GGCCGCCGGT CGCGCCGGAG CCGGGAGAGC CGCCTGCGAC GATCGAACCG
CCGTCGCCCC GGCCGCCCGC GATCGTCGAG CCCGCGCCGC CGGAGCCCGC GCCCGAGCCG
CCCGCGATCG TCGAGCCCGC GCCGCCGGAG CCCGCGCCCG AGCCACCCGC GATCGTCGAG
CCCGCGCCGC CCGACCCGCC TCCGGCGCTC GACACGAGCC TGGCGATCAG GAATCTGGCC
ACGGGCGGAG CGCTCTGTCT GGGGATGTCG ACCGGCAACG GGACCTATGT CGGCTTCCAG
TCCTGCAACG GGTCGGATGC GCAGCGCTGG CGCATGGTGC GTGCCGCGAG CCCTTACTTC
AACGTGAAGA ACGTGCTGGC CGAAGCGCAG GGCAGGGACG TCTGCCTGCG TGCGGCGCCA
TCGGGCCAGA GCCCGGCCAA CCTGGCGCCG TGCGGCGGCG CCGATTACCC GACCACGCGG
ATGTGGCGTG CCAGCATCGG CGCAAGTGGC GCGTTCACGC TGCAGAACAA GCACTGGGTC
GATACCGGCC GCCGCGCGAC GCTTCAGGCG ATGGACCGTA CCCTCGCGAT GCTGCCCGAG
ATCGACGCGC CTGCCGCGCG CTGGACCTAC GACGGCGAAC TCCCGTCGCC GAGACGCGTC
GTGACCGGCG CGCGCAGCGT GCTGCTGGTG TCCGGGCATT TCACGGGACA GCGGGCGAAT
CCGGCGGAGC CGGTGCGCAA GGCCGTCTTC GGCGACGGCG ACGATTTCGC GTCGCTCGCG
CACTACCTGA AGCTGGCGTC GCGCGGCAAG CTGACGTTGA GCGGCACGAT GCTGACGAAC
GTCGATCTCG GCGCGTTTCC GGCAGGTTGC CAGTCGGGCG CGATCCTCGC TCAGGCGAGG
GCTGCCGCGC AGGCGCGCGG CGTCGATGCG AACGGATTCG ATTACCTCTT CGTCGATTAT
CCGCGCTCGA GCGAATGCAA ATTCGCGGGG CTGGCGGCGC GGCCCGGGCA ATGGATTCTG
TCGAACGGCG CCGGCACCGG CTACTGGATG TGGACGCATG AATTCGGTCA TGGGCTCGGC
GCGGGGCATC CCGATTCGCT GCGGAACTGT CCGGTGGCGG ACGGCGCGGT CGTGCTCGGC
AGCCTTTGCG TGACAGGCGG CATCGACGAT CCGACCGACA CGGTGGGCGG CGGCGGGCGG
CGGATGTACC CGGTCGACTA TCAGCTGTTC GCCGGCTGGC TCGACGATGA AGACGTGCCG
ACGCTCGTCA AGCCGGGCAC GTATCGCATC GCGCCGCTGT GGAGCGCGCT GCCGGGCAAG
CAGGGCTATC TTCTGCCGCG CGCGGACGGC TCCACGCTGC TGCTCGAATT CCGGCGGCCG
ATGGGCGCGA AGGGCACGTT CGAGGACTGG CCCGACACGT CGCCGTTCGT CAATGGCGTG
ACGGTGCGCA TCGTCCGCTA TCCGGGCAAC GCCATTCAGA ACACGCTCGT CGACGCGACG
CCGGGCAGCC AGGACGGTAT GAAGGATGCG CCGCTGATGC CGGGCCAGTC GCTCGTCGAC
ACGTTGTCCG GGCGACGCAT CACCGTGCTG TCGGCCGACG GAAGCGGCGC GGTGGTCCGG
ATCGAGCCGG CGTCGTGA
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| Protein sequence | MHSEPNAGRQ AGCFVRGSPV NPVRDEVSKM NPFVSRRAVA PALLCALVLV LSACGGDDSG
APAIVVQEQQ GESGEHVKPA PEIVADGVAV SDEPGAPPDP SYPRPPVAPE PGEPPATIEP
PSPRPPAIVE PAPPEPAPEP PAIVEPAPPE PAPEPPAIVE PAPPDPPPAL DTSLAIRNLA
TGGALCLGMS TGNGTYVGFQ SCNGSDAQRW RMVRAASPYF NVKNVLAEAQ GRDVCLRAAP
SGQSPANLAP CGGADYPTTR MWRASIGASG AFTLQNKHWV DTGRRATLQA MDRTLAMLPE
IDAPAARWTY DGELPSPRRV VTGARSVLLV SGHFTGQRAN PAEPVRKAVF GDGDDFASLA
HYLKLASRGK LTLSGTMLTN VDLGAFPAGC QSGAILAQAR AAAQARGVDA NGFDYLFVDY
PRSSECKFAG LAARPGQWIL SNGAGTGYWM WTHEFGHGLG AGHPDSLRNC PVADGAVVLG
SLCVTGGIDD PTDTVGGGGR RMYPVDYQLF AGWLDDEDVP TLVKPGTYRI APLWSALPGK
QGYLLPRADG STLLLEFRRP MGAKGTFEDW PDTSPFVNGV TVRIVRYPGN AIQNTLVDAT
PGSQDGMKDA PLMPGQSLVD TLSGRRITVL SADGSGAVVR IEPAS
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