| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1107 |
|---|
| Symbol | |
|---|
| ID | 6176641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1220113 |
|---|
| End bp | 1220745 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680863 |
|---|
| Product | cytochrome b561 |
|---|
| Protein accession | YP_001807814 |
|---|
| Protein GI | 172060162 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0878902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG TTCCCGCCAC CGGGCGTGCG GCCGCCACGC CGCCCGCGCG GCCGATCCAT
CCGCTGTGGG TACGCGCGAG CCACTGGCTC AACGCGCTCG CGGCCGTGCT GATGGCGCTA
TCCGGCTGGC GCATCTACGA CGCGTCGCCG ATCTATCCGC CGTTCACGTT TCCTCACGGC
ATCACGCTCG GCGGCTGGCT GGGCGGCGCG CTGCAATGGC ATTTCGCGGC GATGTGGCTG
CTCGTCGGCA ACGGGCTGTT CTACCTGACG ATGTCGCTGG CGACCGGGCG CCTGGTGCGC
AAGATGCTGC CGGTCACGCC GGCATCCGTG TGGCGCGACG TGCGCGCGGC GCTCGGCGGG
CGGCTGTCGC ATGCCGACCT GAGCGTCTAC AACGCGGTGC AGCGCGCGGC ATACCTGACC
GCGATCGTCG ATCTCGTCGT GCTGGTGCTG TCGGGGCTCG CGATCTGGAA ATCCGTGCAG
TTCCCGCTGC TGCGCGAACT GTTCGGCGGT TACGACAACG CGCGCGTCGT GCATTTCTGG
GCGATGTCGC TGCTCGTCGC ATTTTTTGTC GTACACGTCG CGATGGCGCT GCTGGTGCCG
CGCTCGTTGC TCGCGATGCT GCGCGGCCGC TGA
|
|---|
| Protein sequence | MQTVPATGRA AATPPARPIH PLWVRASHWL NALAAVLMAL SGWRIYDASP IYPPFTFPHG
ITLGGWLGGA LQWHFAAMWL LVGNGLFYLT MSLATGRLVR KMLPVTPASV WRDVRAALGG
RLSHADLSVY NAVQRAAYLT AIVDLVVLVL SGLAIWKSVQ FPLLRELFGG YDNARVVHFW
AMSLLVAFFV VHVAMALLVP RSLLAMLRGR
|
|---|
| |