| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1097 |
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| Symbol | |
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| ID | 6176490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1203760 |
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| End bp | 1207098 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641680853 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_001807804 |
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| Protein GI | 172060152 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0967574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCATC TCTTCTATTC GAACCGTCAC GAAACGCTCG CCGACGCACT GCTCGACGAC
CTCGCCGCGT TCCCGGCCCG CAACGGCCCG TGGGCGCCGC AGCAGGTCAT CGTGCCGAGC
GCGGCGCTGC GGCGCCGTCT CGAGCTCGAC ATCGCCGCGC GCCACGGCGT GTGCGCGAAC
GTCGAGTTCA CGTATCTCGC GCAATGGCTG TGGGCGCAGA TCGGCCGCGT GCTGACGGTG
CCCGCGCGTT CGCCGTTCGC ACCCGACCGC CTCGTATGGC GCTGCTACCG GTTGTTCGCG
CAGGCCGAGG GGGACGCGCC GTGGCTCGCG TCGCCGCGGC TGGCCGCGTA TCTGTCCGCA
TCCGACGACG CGATGCGCTA CGAGCTGGCG CAGCGCGTCG CGGCCGTGCT CGATCATTAC
CTGACCTATC GGCCCGAATG GCTGGCCGCG TGGCAGGCCG GCGAGTCGGT GCTCGCGGGC
GACGCCGCGC CGCGCGGGAT CAGCGATGCC GCACGCGACG ACGAGCACTG GCAGGCCGCG
CTGTGGCGCG CGCTGCTCGC CGAGCTGAGC GACAGCGGCA CGCCGCCCGC GCATCGCTTC
CTCGTGGAGG CGCGCAACCT CGATCCGGAA ACCGTCGCGC GCGCCGACTG GCCGGAATCG
GTCAGCGTGT TCGCGCTGCC GACGATGCCG CCGCTGCACG TCGCGCTGTT GCGCGAGCTG
TCGCGCTGGA TCGACGTGCG CGTCTATGCG CTCAACCCGT GCCGCGAATT CTGGTTCGAC
ATCGTCACCG CGGCGCATGC CGAGGCGCTC GATGCGGCCG GCCGGCTCGA CTATCAGCAA
GTCGGCCATC CGTTGCTCGC GGAGTGGGGC CGGCAGACGC AGGCGCAACT GCACATGCTG
CACGAACTGA CCGAGAGCGC CGCATTAGGC GACGCGTCGC GCTTCGTCGG CAATCCCGCG
CCGACCTGGC TCGCGCGCGT GCAGAACGCG ATCCTCGACC TGCAGCCGGA GGCCGAACTC
GGCGAAGCGC CGGCCGAGCG CGGGATCGAG GTGCACGTGT GCCACAGTCT CGCGCGTCAG
CTCGAAGTGC TGCATGACCG GCTGCTCGCG TGGTTCGACG CCGACGCGAC GCTGCAGCCG
TCCGATGTGC TGGTGGCGGT CGCCGATCTT GCGGCGGCCG GGCCGCTGAT CGATGCGGTG
TTCGGCACGG CGGGCGCCGG CGGTGCGCGA GTGCCTTACC GGATCACCGG CCTGCCGCCG
TCGCAGGCGA ACCCGGTCGC GCGCGTGCTG CTCGAATGGC TCGCGTTGCC GGAGCGGCAG
GTCGGCGCGC CGGAGCTGGT CGAATGGCTG CGCGTCGACG CGGTCGCGGC CCGTTACGGC
ATCGACGCCG CCGCGCTCGA GACAGTGCAG ACCTGGCTCG CGGCCGCCGG CGCGCGGCGC
GGGCTGTCGC CGACGGCGAG CGACGATGCG GCGGTGCCAG CGCCGCGCCA TACATTCTCC
GATGCGCTCG CGCGGCTCTT TCTCGGCTAT GCGATGCCCG AAGGCGCGGC CCCGGTCGGC
GCGTGGCTGC CGATCGAGGC GGCCACCGGC AGCGAGGCCG AACTGCTCGG CCGGCTCGCG
CGCTTTACCG ACGATCTCGA TGGCTTTTCG CGGCGGCTCG CCAGCGCGCA TACGCCGCGC
GCATGGAGCG AACTGTTCGC CGACACCCTC GCGCGCTTCT TCGATTCCGG CGCCGCGTAT
GCCGATGCGC TCGCGGGCGT GCGCGACGCG CTCGACGCGA TGCTCGCCGC GATGACGGAA
GGCGCGCCCG ACGAGGCGTT GCCGGCGGCC GTCGTGCGCG CGGGTCTGGC GGCCGCGCTC
GACGATCCGG CGCGCGGCGG GGTGCCGTGG GGCGGCGTCA CGTTCTCGTC ACTGACGAGC
TTGCGCGGCT TGCCGTACCG CGTCGTGTGC CTGCTCGGCA TGGACGACGG CGTGCTGCCG
AGCCTCGCGC GCGCGGACGA GTTCGACCTG ATGGCCGTCC TGCCGAAGCT CGGCGATCGC
CAGCGCCGCG ACGACGAGCG CAACCTGTTT CTCGACCTGC TGCTCGCCGC GCGCGACCGG
CTGCTGATTG CCTATACGGG GCGAAGCATT CGCGACAACG CGCCGTTGCC GCCCGCGGCG
CTCGTCGACG AACTGCTCGA CCATCTCGCG CTCGTCACGG CCGGCGCGGA CACCGCACCG
GGCGCGGTCG ATGCCGCGCG ACGCGCGTTC ATCGTCGAGC ATCCGCTGCA ACCGTTCGCG
GCCGAGTATT TCCGGCCCGG CAGCGAACTG GCGTCGTACG ACGCCGAGCG CGCGACGCTC
GCGTCGCTGC TGGCGGCCGA AGCCGCGCGC GACGCGACGC GCGAGCAGCC GTTCTTCGCG
CAGCCGCTGC CGGCCGAGCC GGTCGAGCCC GTTGCATTCA ACGAATTCGA ACGTTTCTGG
CGCCATCCGG CCCGCGCGCT GCTGCGTGCG CGGCTCGGCA TCGTGTTGTC CGACGCGCAG
GCCGAACTGC TCGACACGGA GCCGTTCGCA CTCGACTTCG CCGGCAGCGA CGCGCTCGCC
GAGCGCGTGC TGCCGCTCCT GATCGAATCG GATGAAGGCG GCGTGCACGA TCATGCGCTG
CGCATCGCGG ACACCAGCCC CGAACTGCCC GGCGGCGCGA CGGGTGCCGT CTGGCGCGAC
CAGGCGCTCG GCTCGATGAT GCAGCTTGCG TCGAACGTGC GCCGTGCGCT GGCCGACGGC
ATGGAGCGGC GGCCGTTCAC GCTCGCGATC ACGCCTGCAT GGCCCGACAC CGACCAGGCG
CTGTTCGGTG CCGATGACGC GATGCTGTCG GGCGACGCGC TGAGTGCGCC GCTCGAATTG
CACGGCACGC TGAACAGGGT GACGCCGGCG GGCCAGATCA TCTATCGCTA TGCGCGGCCG
AGCGCGCGTG ACTACCTGTC CGCGTGGCTT GCGCACCTCG TCTATTGCGC GGTGGAGCCC
GACGGCCCGC GCCGCACTAT GTGGTTCGGC AGTGGCGGCG CATTCGAGCT CACGCCGGTC
GCGACGCCGC TCGAGCGGCT CGCGCCGCTC GCCGCGCTGT TTCGCGCGGG GCGGCGCATG
CCGCTGCGGT TTTTCCCGCG CAGCGCATGG GCGCGCGTTT CCGACGGCGA GGCAAAGGCG
GCGAGCGTCT GGATCAACGA GCGCGTGGTG AGCGAGGCGG ACGATCCGGC CATCGCGATC
GCGTGGCGCG GCGCCCATCC GTCGCTCGAC GAGCCGTTCG GCACACTTGC GCGGATCGTG
TTCGAGCCGA TGCTGGAACA TCTGAAGGAG ATCGCATGA
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| Protein sequence | MLHLFYSNRH ETLADALLDD LAAFPARNGP WAPQQVIVPS AALRRRLELD IAARHGVCAN
VEFTYLAQWL WAQIGRVLTV PARSPFAPDR LVWRCYRLFA QAEGDAPWLA SPRLAAYLSA
SDDAMRYELA QRVAAVLDHY LTYRPEWLAA WQAGESVLAG DAAPRGISDA ARDDEHWQAA
LWRALLAELS DSGTPPAHRF LVEARNLDPE TVARADWPES VSVFALPTMP PLHVALLREL
SRWIDVRVYA LNPCREFWFD IVTAAHAEAL DAAGRLDYQQ VGHPLLAEWG RQTQAQLHML
HELTESAALG DASRFVGNPA PTWLARVQNA ILDLQPEAEL GEAPAERGIE VHVCHSLARQ
LEVLHDRLLA WFDADATLQP SDVLVAVADL AAAGPLIDAV FGTAGAGGAR VPYRITGLPP
SQANPVARVL LEWLALPERQ VGAPELVEWL RVDAVAARYG IDAAALETVQ TWLAAAGARR
GLSPTASDDA AVPAPRHTFS DALARLFLGY AMPEGAAPVG AWLPIEAATG SEAELLGRLA
RFTDDLDGFS RRLASAHTPR AWSELFADTL ARFFDSGAAY ADALAGVRDA LDAMLAAMTE
GAPDEALPAA VVRAGLAAAL DDPARGGVPW GGVTFSSLTS LRGLPYRVVC LLGMDDGVLP
SLARADEFDL MAVLPKLGDR QRRDDERNLF LDLLLAARDR LLIAYTGRSI RDNAPLPPAA
LVDELLDHLA LVTAGADTAP GAVDAARRAF IVEHPLQPFA AEYFRPGSEL ASYDAERATL
ASLLAAEAAR DATREQPFFA QPLPAEPVEP VAFNEFERFW RHPARALLRA RLGIVLSDAQ
AELLDTEPFA LDFAGSDALA ERVLPLLIES DEGGVHDHAL RIADTSPELP GGATGAVWRD
QALGSMMQLA SNVRRALADG MERRPFTLAI TPAWPDTDQA LFGADDAMLS GDALSAPLEL
HGTLNRVTPA GQIIYRYARP SARDYLSAWL AHLVYCAVEP DGPRRTMWFG SGGAFELTPV
ATPLERLAPL AALFRAGRRM PLRFFPRSAW ARVSDGEAKA ASVWINERVV SEADDPAIAI
AWRGAHPSLD EPFGTLARIV FEPMLEHLKE IA
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