| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1095 |
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| Symbol | |
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| ID | 6179078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1199613 |
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| End bp | 1200980 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680851 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001807802 |
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| Protein GI | 172060150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.212668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TGCAGCGCCA TCTGGGCGCA CGGCACATCC GCTTTCTCGC GCTGGGCTCG
GCGATCGGTA CCGGCCTGTT CTACGGCTCG GCGTCCGCGA TCCAGCTCGC GGGCCCGGCG
GTGATCCTGG CCTACATCCT GGGCGGCGCG GCCGTCTACA TGGTGATGCG CGCGCTCGGC
GAAATGGCCG TGCGCGAACC CGTCGCCGGC TCGTTCGGCC ACTACGCGAC CGAAAACCTC
GGCCCGTTCG CCGGCTTCGT CACCGGCTGG ACCTACACGC TCGAAATGGT GATCGTCGCG
ATCGCCGACA TCACCGCGTT CGGCATCTAC ATGAGCTTCT GGTTTCCGGA CGTGCCGCAA
TGGATCTGGG TGCTCGGCGT CGTCGCGGTC ATCTGCGGAC TGAACCTGTG CCACGTGAAG
GTGTTCGGCG AGCTCGAATT CTGGCTGTCG ATCATCAAGG TCGGCGCGAT CGTCGCGATG
ATCGGCGGCG GCGTCGCGAT CCTGCTGACC GGCATGCACT TCGGCCATTC GGCCGACGTG
CCGACCTTCG CGAACCTGTG GAACCATGGA GGCTTCTTCC CGAACGGGAT CGGCGGGCTC
ATCGCGTCGC TGTCGGTCGT GATCTTCGCG TACGGCGGCA TCGAGGTGAT CGGGATGAGC
GCCGGCGAGG CGAAGGATCC GGAGCGCGTG ATTCCGCGCG CGATCAACGC GGTACCCGTG
CGGATCCTGC TGTTCTACGT GCTGACGATG GTCGTGCTGA TGTCGATCAG CCCGTGGACC
GGCGTCGGCA GCGACGGCAG CCCGTTCGTG CAGATCTTCT CGGCGCTCGG CGTGAAGTCG
GCCGCGACGA TCCTCAACCT CGTGGTGATC AGCGCGGCGA TCTCGGCGAT CAACAGCGAC
ATCTTCGGCG CGGGCCGGAT GATGTTCGGG ATGGCGCGGC AGGGTCAGGC GCCGCGCGTG
CTGACGACAA CGTCGCGGCA CGGCGTGCCG TGGGTCACGG TGCTCGTGAT GGCCGGCGCG
CTGCTGGTCG GCGTGGTGCT CAACTATCTG ATGCCGAAGG ACGTGTTCCT GGTGGTCGCC
GCGATCGCGA CGTTCGCGAC CGTGTGGGTA TGGCTGATGA TCCTGCTGTC GCAGGTCGCG
ATGCGCCGTC GCCTGTCGAG CGCGGAACTC GCCGCGCTGA AGTTCAAGGT GCCGCTGTGG
CCGGTCGCGC CCGCGCTGAC GATCGCGTTC ATGGGTTTCG TGATCGTGAT GCTCGGCTGG
TTCGATGACA CGCGGGTCGC GCTCTACGTC GGCGCGGGGT GGCTCGTGCT GCTCGCGGTC
GTATTCTACG CACGGATCCG CCCGAAGTTC GCGGCTGCGT CACGTTGA
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| Protein sequence | MKNLQRHLGA RHIRFLALGS AIGTGLFYGS ASAIQLAGPA VILAYILGGA AVYMVMRALG
EMAVREPVAG SFGHYATENL GPFAGFVTGW TYTLEMVIVA IADITAFGIY MSFWFPDVPQ
WIWVLGVVAV ICGLNLCHVK VFGELEFWLS IIKVGAIVAM IGGGVAILLT GMHFGHSADV
PTFANLWNHG GFFPNGIGGL IASLSVVIFA YGGIEVIGMS AGEAKDPERV IPRAINAVPV
RILLFYVLTM VVLMSISPWT GVGSDGSPFV QIFSALGVKS AATILNLVVI SAAISAINSD
IFGAGRMMFG MARQGQAPRV LTTTSRHGVP WVTVLVMAGA LLVGVVLNYL MPKDVFLVVA
AIATFATVWV WLMILLSQVA MRRRLSSAEL AALKFKVPLW PVAPALTIAF MGFVIVMLGW
FDDTRVALYV GAGWLVLLAV VFYARIRPKF AAASR
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