Gene BamMC406_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1090 
Symbol 
ID6179015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1195048 
End bp1195518 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID641680846 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001807797 
Protein GI172060145 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.319701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCA TCGATCGCAA GCTGCTGGAG CTGTTGCAGG CAGATGCCAC ATTGCCGATC 
GCGGAACTCG CGCAGCGCGT GAACCTGTCG CAGACGCCCT GCTGGAAGCG CGTGCAGCGG
CTCAAGGAAA CCGGCGCGAT CCGCGCGCAG GTCGCGCTGT GCGATCCACG CAAGCTCGGG
GTCGGCACGA CCGTGTTCGT CGCGATTCGG ACGAACCAGC ACACCGAGGA GTGGGCGCAG
CGTTTCACGC AGGCCGTGCG CGACATGCCG GAAGTCGTCG AGGTGTACCG GATGAGCGGC
GAGACCGACT ATCTGCTGCG GGTCGTGGTG GCCGGCATCG ACGATTACGA TCGCGTCTAC
AAGCAGCTGA TCCGCGCGGT GCCGCTGTTC GACGTGAGCT CGTCGTTCGC GATGGAGCAG
ATCAAGTATT CGACCGCGCT GCCGGTGCGC GATCTGTCCG AGCCGGCGTA G
 
Protein sequence
MDAIDRKLLE LLQADATLPI AELAQRVNLS QTPCWKRVQR LKETGAIRAQ VALCDPRKLG 
VGTTVFVAIR TNQHTEEWAQ RFTQAVRDMP EVVEVYRMSG ETDYLLRVVV AGIDDYDRVY
KQLIRAVPLF DVSSSFAMEQ IKYSTALPVR DLSEPA