| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1078 |
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| Symbol | |
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| ID | 6177697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1176993 |
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| End bp | 1180301 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680834 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001807785 |
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| Protein GI | 172060133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.204501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CGCGCCCCTT CATCACCCGC CCCGTCGCGA CGACGCTGCT CGCGCTCGGC
GTCGCGCTCG CCGGCCTGTT CGCGTTCATC AAGCTGCCGG TGTCGCCGCT GCCGCAGGTC
GACTTCCCGA CCATCTCGGT GCAGGCGTCG CTGCCCGGCG CGAGCCCCGA GACCGTCGCG
ACCAGCGTGA CGAGCCCGCT CGAGCGGCAC TTGGGCTCGA TCGCCGACGT CAGCGAAATG
ACGTCGACCA GCACGGTCGG CAACGCGCGG ATCATCCTGC AGTTCGGGCT GAACCGCGAC
ATCGACGGCG CCGCGCGCGA CGTGCAGGCC GCGATCAACG CGGCGCGCGC GGACCTGCCC
GCGTCGCTCA AAAGCAACCC GACGTACCGC AAGGTCAACC CGGCCGACTC GCCGATCATG
ATCGTGTCGC TCACGTCGGA AACGTCGTCG CCGGCGAAGC TGTACGACGC CGCGTCGACG
GTGCTGCAGC AGTCGCTGTC GCAGATCGAC GGGATCGGCC AGGTGTCGGT GAGCGGCTCC
GCGAACCCGG CCGTGCGCGT CGAGCTCGAA CCGCATGCGC TGTTCCACTA CGGGATCGGC
CTCGAGGACG TGCGGGCCGC GCTCGCGTCC GCGAACGCGA ACAGCCCGAA GGGCGCGATC
GAATTCGGCC CGAAGCACTA CCAGCTCTAT ACGAACGACC AGGCGTCGCA TGCGTCGCAG
TATAGCGACC TGGTCGTCGC GTACCGCAAC GGCGCGGCCG TGCGGCTGTC CGACCTGTCG
GAGGTCGTCG ACTCGGTCGA GGACCTGCGC AACCTCGGCC TGTCGAACGG CAAGCGCGCG
GTGCTCGTGA TCCTCTACCG CTCGCCCGGC GCGAACATCA TCGAGACGAT CGACCGCGTG
CGCACCGCGC TGCCGCAGCT CACCGCGTCG CTGCCGGCCG ATATCACGGT GACGCCGGTG
CTCGACCGTT CGACGACGAT CCGGGCGTCG CTGAAGGACA CCGAGCACAC GCTGCTGATC
GCGATCAGCC TCGTCGTGAT GGTCGTGTTC CTGTTCCTGC GCAACTGGCG CGCGACGCTG
ATTCCGAGCG TCGCGGTGCC GATCTCGATC ATCGGCACGT TCGGCGCGAT GTACCTGCTC
GGCTTCTCGA TCGACAATCT GTCGCTGATG GCGCTGATCG TCGCGACCGG CTTCGTCGTC
GACGATGCGA TCGTCGTGCT CGAGAACATC ACGCGTCACA TCGAGAACGG CAAGCCGCGG
CTGCAGGCCG CGTTCGACGG CGCGCGCGAG GTCGGCTTCA CGGTCCTGTC GATGAGCATC
TCGCTCGTCG CGGTGTTCCT GCCGATCCTG CTGATGGGCG GCATCGTCGG GCGCCTGTTC
CGCGAATTCG CGCTGACGCT GTCGCTCGCG ATCGCGGTAT CGCTCGCGGT CTCGCTGACG
GTCACGCCGA TGATGTGCGC GCGGCTGCTG CGCGAGCCGC ACGACGCGCA CGAGGAAGGC
CGCCTCGGCC GGTTCCTGGA GCGCTTCTTC GCGCGCATGC AGCGCGGCTA CGAGCGCTCG
CTGTCGTGGG CGCTGCGCCG CCCGCTGCTG GTCCTGCTGA TCCTGTTCGC GACGATCGGG
CTGAATGTCT ATCTGTACAT CATCGTGCCG AAGGGCTTCT TTCCGCAGCA GGACACCGGG
CTGATGATCG GCGGCATTCG GGCCGACCAG TCCACGTCGT TCCAGGCCAT GAAGCAGAAG
TTCACCGAGA TGATGCGGAT CGTGCAGAGC AACCCGAACG TGCAGAGCGC CGCGGGCTTT
ACCGGCGGCA CGCAGACCAA TTCGGGCTTC ATGTTCGTCA CGCTGAAGGA CCGCACCGAG
CGCAAGCTGT CGGCCGACCA GGTGATCCAG CAGCTGCGCA AGCCGCTGGC GGATGTCGCC
GGCGCGAGCA CGTTCCTGCA GGCGGCGCAG GACATCCGCG TCGGCGGCCG GCAGAGCAAC
GCGCAATACC AGTTCACGCT GCTCGGCGAT TCGAGCACCG ACCTGTACAA GTGGGGCCCG
CTGCTGACCG AGGCGCTGCA GAAGCGCGCC GAGCTGACCG ACGTCAACTC GGACCAGCAG
CAAGGCGGGC TGGAGGCGAT GGTGACGATC GACCGCGCGA CCGCCGCGCG GCTCGGCATC
AAGCCCGCGC AGATCGACAA CACGCTGTAC GACGCGTTCG GCCAGCGCCA GGTCTCGACG
ATCTACAACC CGCTGAACCA GTACCACGTG GTAATGGAAG TCGCGCCGAA ATACTGGCAG
AGCCCGCAAA TGCTGAACGA AGTGTGGATC AGCACGTCGG GCGGCAGCGC GAACGGCTCG
CAGTCGACCA ACGCGGCGGC CGGCACCTTC GTCGCGACCT CGGCCGGCAC GTCGAGCGCC
GGCACGGCCG CCACCAGCGC CGCGGCGATC GCGTCCGATT CCGCGCGCAA CCAGGCGTTG
AACTCGATCG CGTCGAGCGG CAAGTCGAGC GCGTCGTCGG GCGCGGCGGT GTCGACGTCG
AAGTCGACGA TGATCCCGCT GTCCGCGATC GCGACCTTCG GCCCGAGCAC GACGCCGCTG
TCGGTCAACC ACCAGGGCCT CTTCGTCGCG ACGACGATCT CGTTCAACCT GCCGCCGGGT
GTGTCGCTGT CGCAGGCGAC CCAGGCGATC TACCAGACGA TGGCGCAGAT CGGCGTGCCG
CCGACGATCG TCGGCAGCTT CCAGGGCACC GCGCAGGCGT TCCAGCAATC GCTGAACAAC
CAGCCGATCC TGATCCTCGC GGCGCTGCTG GCCGTCTACA TCGTGCTCGG GATCCTGTAC
GAGAGCTACA TCCATCCGAT CACGATCCTG TCGACGCTGC CGTCGGCCGG CGTCGGTGCG
CTGCTCGCGC TGCTGCTGTT CAAGACGGAA TTCAGCATCA TCGCGCTGAT CGGCGTGATC
CTGCTGATCG GCATCGTGAA GAAGAACGCG ATCATGATGG TCGACTTCGC GATCGACCAG
ACGCGCAACG GCAACAAGTC GTCGTTCGAT GCGATCCACG AAGCGTGCCT GCTGCGCTTC
CGGCCGATCA TGATGACAAC GATGGCGGCG CTCCTCGGCG CGCTGCCGCT CGCGTTCGGC
CATGGCGACG GCGCGGAGCT GCGCGCGCCG CTCGGGATCG CGATCGCCGG CGGCCTGATC
ATGTCGCAGG TGCTGACGCT CTATACGACG CCGGTCGTCT ATCTGTACAT GGACCGGCTG
CGCGTGTGGG GCGAGAAGCG CCGCAACCGC CGCGGCAATT CGGGCGGGCC GGCGGTGGCC
GGGGAGTAA
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| Protein sequence | MNLSRPFITR PVATTLLALG VALAGLFAFI KLPVSPLPQV DFPTISVQAS LPGASPETVA
TSVTSPLERH LGSIADVSEM TSTSTVGNAR IILQFGLNRD IDGAARDVQA AINAARADLP
ASLKSNPTYR KVNPADSPIM IVSLTSETSS PAKLYDAAST VLQQSLSQID GIGQVSVSGS
ANPAVRVELE PHALFHYGIG LEDVRAALAS ANANSPKGAI EFGPKHYQLY TNDQASHASQ
YSDLVVAYRN GAAVRLSDLS EVVDSVEDLR NLGLSNGKRA VLVILYRSPG ANIIETIDRV
RTALPQLTAS LPADITVTPV LDRSTTIRAS LKDTEHTLLI AISLVVMVVF LFLRNWRATL
IPSVAVPISI IGTFGAMYLL GFSIDNLSLM ALIVATGFVV DDAIVVLENI TRHIENGKPR
LQAAFDGARE VGFTVLSMSI SLVAVFLPIL LMGGIVGRLF REFALTLSLA IAVSLAVSLT
VTPMMCARLL REPHDAHEEG RLGRFLERFF ARMQRGYERS LSWALRRPLL VLLILFATIG
LNVYLYIIVP KGFFPQQDTG LMIGGIRADQ STSFQAMKQK FTEMMRIVQS NPNVQSAAGF
TGGTQTNSGF MFVTLKDRTE RKLSADQVIQ QLRKPLADVA GASTFLQAAQ DIRVGGRQSN
AQYQFTLLGD SSTDLYKWGP LLTEALQKRA ELTDVNSDQQ QGGLEAMVTI DRATAARLGI
KPAQIDNTLY DAFGQRQVST IYNPLNQYHV VMEVAPKYWQ SPQMLNEVWI STSGGSANGS
QSTNAAAGTF VATSAGTSSA GTAATSAAAI ASDSARNQAL NSIASSGKSS ASSGAAVSTS
KSTMIPLSAI ATFGPSTTPL SVNHQGLFVA TTISFNLPPG VSLSQATQAI YQTMAQIGVP
PTIVGSFQGT AQAFQQSLNN QPILILAALL AVYIVLGILY ESYIHPITIL STLPSAGVGA
LLALLLFKTE FSIIALIGVI LLIGIVKKNA IMMVDFAIDQ TRNGNKSSFD AIHEACLLRF
RPIMMTTMAA LLGALPLAFG HGDGAELRAP LGIAIAGGLI MSQVLTLYTT PVVYLYMDRL
RVWGEKRRNR RGNSGGPAVA GE
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