| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1064 |
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| Symbol | astD |
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| ID | 6176976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1159500 |
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| End bp | 1160963 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680820 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_001807771 |
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| Protein GI | 172060119 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0546106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC TCTTCATCGA CGGCGCCTGG ATCGCAGGCT CGGGCCCCGC CTTCGCTTCG
CGCAACCCGG GCACCGACGC GATCGCGTGG CAGGGCGACA GCGCGTCGGC AGCCGACGTC
GACCGCGCGG TCGCGAGCGC GCGCCGCGCG TTCGCCGGCT GGTCGGCGCT CGACTTCGAA
GCACGCTGCG CGATCGTCAA GCGTTTCGCG GCGTTGCTCA CCGAGCGCAA GGAAGCGATC
GCGACGGCGA TCGGCCGCGA GACGGGCAAG CCGCTGTGGG AAGCGCGCAC CGAAGTCGCG
GCGATGGCCG CGAAGGTCGG CATCTCGATC CAGGCGTACC AGGAACGCAC CGGCGAGAAG
CGCCAGGACA TGGCCGACGG CGTCGCGGTG CTGCGCCATC GTCCGCACGG GGTCGTCGCG
GTGTTCGGCC CGTACAACTT CCCGGGCCAC TTGCCGAACG GCCACATCGT GCCGGCGCTG
ATCGCGGGCA ACACGGTCGT GTTCAAGCCG TCGGAGCTCG CGCCGGGCGT CGCGCGCGCG
ACGGTCGAGG TGTGGCAGGA AGCCGGCCTG CCGGCCGGCG TGCTGAACCT CGTGCAGGGC
GAGAAGGACA CCGGCATCGC GCTCGCGAAT CACCGGCAGA TCGACGGCCT CTTCTTCACC
GGCAGCTCGG ATACCGGCAC GCTGCTGCAC AAGCAGTTCG GCGGCCGTCC GGAGATCGTG
CTCGCGCTCG AGATGGGCGG CAACAACCCG CTCGTGATCG GCGAAGTCGA GGACCTCGAC
GCGGCCGTGC ACCACACGAT CCAGTCGGCG TTCCTGTCGG CCGGCCAGCG CTGCACGTGC
GCGCGCCGCA TCTTCGTGCC GCAGGGTGCG TTCGGCGAGC GCTTCCTCGC CCGCTTCGCC
GACGTCACGT CGAAGATCAT GGCCGACGTG TTCGACGCCG ATCCGCAGCC GTTCATGGGC
GCGGTGATCT CGGCGCGCGC GGCCGCGAAG CTCGTCGATG CGCAATCGCG CCTGGTCGAG
CAGGGCGCGA AGCCGATCAT CGAGATGACG CAGCGCGATC CGCGCCTGGG TTTCGTGAAC
GCGTCGATCA TCGACGTGAC CGGCGTGGCT AACCTGCCCG ACGAAGAGCA CTTCGGCCCG
CTCGCGCAGA TCGTCCGCTA CGCGACGTTC GACGAAGCGA TCGAGCGCGC GAACGACACG
GCGTTCGGCC TGTCCGCCGG CCTGCTGGCC GACGACGCGC ACGCCTGGGA GCACTTCCGC
CGCACGATCC GTGCGGGGAT CGTCAACTGG AACCGCCCGA CCAACGGCGC ATCGTCCGCC
GCGCCGTTCG GCGGCACCGG TCGCTCGGGC AACCATCGTC CGAGCGCGTA CTACGCCGCC
GACTATTGCG CGTATCCGAT GGCGTCGGTG GAAAGCACGC AACTGACCTT GCCCGCGAGC
CTGTCGCCGG GCCTGCACTT CTGA
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| Protein sequence | MTELFIDGAW IAGSGPAFAS RNPGTDAIAW QGDSASAADV DRAVASARRA FAGWSALDFE
ARCAIVKRFA ALLTERKEAI ATAIGRETGK PLWEARTEVA AMAAKVGISI QAYQERTGEK
RQDMADGVAV LRHRPHGVVA VFGPYNFPGH LPNGHIVPAL IAGNTVVFKP SELAPGVARA
TVEVWQEAGL PAGVLNLVQG EKDTGIALAN HRQIDGLFFT GSSDTGTLLH KQFGGRPEIV
LALEMGGNNP LVIGEVEDLD AAVHHTIQSA FLSAGQRCTC ARRIFVPQGA FGERFLARFA
DVTSKIMADV FDADPQPFMG AVISARAAAK LVDAQSRLVE QGAKPIIEMT QRDPRLGFVN
ASIIDVTGVA NLPDEEHFGP LAQIVRYATF DEAIERANDT AFGLSAGLLA DDAHAWEHFR
RTIRAGIVNW NRPTNGASSA APFGGTGRSG NHRPSAYYAA DYCAYPMASV ESTQLTLPAS
LSPGLHF
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