| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1048 |
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| Symbol | |
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| ID | 6177363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1140047 |
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| End bp | 1142191 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680804 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001807755 |
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| Protein GI | 172060103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.898886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAT CGAACCGTCG TGACTTCCTG CGCGTCGCCG CCGGCACTGC CGGCGCCGCC
GCGCTGAACC TGTTCCCGCC CGTGATCCGC GATGCGCTTG CGATTCCGGC GAACCGCCGT
ACCGGCACCA TCCGCGATAT CGAACACATC GTGATCCTGA TGCAGGAGAA CCGTTCGTTC
GACCACTACT TCGGCACGAT GCGCGGCGTG CGCGGCTTCG GCGATCCCCG CCCGCTGCGC
CTCGCGAACG GCAAGTCGGT GTTCCATCAG CCGGTCGGCC CGGCCGAGCT GCTGCCGTTT
CACCCGGGCG CGGACAAGCT CGGCCTGCAG TTCCTGCAGG ACCTGCCGCA CGGCTGGCAG
GACATGCACG CCGCGTGGAA CAAGGGCCGC TACGACCGGT GGGTCCCGAA CAAGGGCACC
ACGACGATGG CGTACCTGAA GCGCGACGAC ATCCCGTTCC ACTACCAGCT CGCCGACGCA
TTCACGATCT GCGACGCGTA TCACTGCGCG ATCCCGAGTT CGACCGACCC GAACCGCTAC
TACATGTGGA CGGGCTACGT CGGCAACGAC GGCACGGGCG GCGGCCCGGT GCTCGGCAAC
GAGGAAAAGG GCTACGGCTG GACGACCTAT CCGGAAGTGC TCGAGCAGGC CGGCGTGTCG
TGGAAGATCT ACCAGGACGT CGGCACCGGG CTCGACGCGA ACGGCTCGTG GGGCTGGACG
CAGAACCCGT ACATCGGCAA CTACGGCGAC AACGCGCTGC TCTACTTCAA CCAGTACCGC
AGCGCGCTGC CCGGCACGCC GCTGTACGAC AAGGCGCGCA CCGGCACCAA CATCAGCGCC
GGCGGTACGC TGTTCGACGT GCTGCAGCAG GACGTGAAGA ACGGCACGCT GCCGCAGGTG
TCGTGGATCT GCGCGCCGGA AGCGTACTCG GAACACCCGA ACTGGCCGGC CAACTACGGC
GCGTGGTACA TCGAGCAGGT GCTGAAGGTG CTCGTGTCGA ACCCGGACGT GTGGAGCAAG
ACCGCCCTCT TCATCACCTA CGACGAGAAC GACGGCTTCT TCGACCACGT GCCGCCGCCG
TTCGCGCCGC AGTCGCGCGA CAACGGGCTG TCGACGGTCG CGACGACCAA CGAGGTGTTC
GCCGGCGACG CGTCGCACAT GGCCGGCCCG TACGGGCTCG GGCCGCGCGT GCCGATGCTG
GTCGTGTCGC CGTGGACCAA GGGCGGCTGG GTCTGCTCGC AGACCTTCGA TCACACGTCG
CTGCTGCAAT TCATCGAAGC GCGCTTCGGC GCGCAGTATC CGGTGACGGC CGCCAACGTG
TCGCCGTGGC GCCGTGCGGT GTGCGGCGAC CTGACGTCGG CGTTCGAATT CGCGACCGCC
GACACCGCAT GGCCGACGCT GCCCGACACG AGCGGCTATG CGCCGCCCGA CCGCGTGCGC
CACCCCGACT ACATCCCGGT GCCGCCGGTG CTGCAGAAGC TGCCGAAACA GGAGGCCGGG
CTGCGTCCGG CGCGCGCGCT GCCGTACGAG CTGTTCGTGC ACGGCCGCGT CGAAGCCGCG
AACGGCCTGT TCCGGCTGAC CTTCGCGAAC ACCGGCCGCG CGGGCGCGGC ATTCCAGGTG
CAGTCGCGCA ACCGCGTCGA CGGCCCGTGG GCGTACACGG TCGAAGCCGG CAAGCGGGTC
GCCGACACGT GGAGCGCCGC GGCATCGCTC GGCCTGTACG ACCTCGACGT GTACGGCCCG
AACGGCTTCT ACTGCCATTT CCGCGGCCCG TTCGCGACCG GCGTCGGCAG CGCGAGCGTG
AACCCCGAGG TGATCTACGG CTACGACGTC GCGAACGGCA ACATCACGCT GCGCCTGATG
AACCGCGGCC ACAAGACCGT GCAGCTCAAG GTGACGAACG CATACGGCCA CGGCCGCGCG
CGCACGTTCG ACCTCGCGCC GGGCGCGCAT GTCGACGACT ACTGGGATCT GCGCGGCAGT
CACGGCTGGT ACGACCTGAC CGTCAGCGAC GGCCGTCCGC TCGGCTTCCT GCGCCGCTTC
GCTGGCCACG TCGAGACCGG CCGCCCGAGC ACGAGCGACC CGGCCATCCG CACGAACGCG
TCGCACGACG ACGCCGAAGC CGCATCGGAC GCCCTGTCCG ACTGA
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| Protein sequence | MTRSNRRDFL RVAAGTAGAA ALNLFPPVIR DALAIPANRR TGTIRDIEHI VILMQENRSF
DHYFGTMRGV RGFGDPRPLR LANGKSVFHQ PVGPAELLPF HPGADKLGLQ FLQDLPHGWQ
DMHAAWNKGR YDRWVPNKGT TTMAYLKRDD IPFHYQLADA FTICDAYHCA IPSSTDPNRY
YMWTGYVGND GTGGGPVLGN EEKGYGWTTY PEVLEQAGVS WKIYQDVGTG LDANGSWGWT
QNPYIGNYGD NALLYFNQYR SALPGTPLYD KARTGTNISA GGTLFDVLQQ DVKNGTLPQV
SWICAPEAYS EHPNWPANYG AWYIEQVLKV LVSNPDVWSK TALFITYDEN DGFFDHVPPP
FAPQSRDNGL STVATTNEVF AGDASHMAGP YGLGPRVPML VVSPWTKGGW VCSQTFDHTS
LLQFIEARFG AQYPVTAANV SPWRRAVCGD LTSAFEFATA DTAWPTLPDT SGYAPPDRVR
HPDYIPVPPV LQKLPKQEAG LRPARALPYE LFVHGRVEAA NGLFRLTFAN TGRAGAAFQV
QSRNRVDGPW AYTVEAGKRV ADTWSAAASL GLYDLDVYGP NGFYCHFRGP FATGVGSASV
NPEVIYGYDV ANGNITLRLM NRGHKTVQLK VTNAYGHGRA RTFDLAPGAH VDDYWDLRGS
HGWYDLTVSD GRPLGFLRRF AGHVETGRPS TSDPAIRTNA SHDDAEAASD ALSD
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