| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1047 |
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| Symbol | |
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| ID | 6176010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1138549 |
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| End bp | 1139697 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680803 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001807754 |
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| Protein GI | 172060102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.545009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC GTCATTCCCT GCTGTCGGTG TCGGTCGTAT CCGCCTTTGC CCTCCTCTCG
CAACAAGCCG CCCGGGCCGC CGACGCGACC GACGTGAAGG TCGGCTTCGC CGCGCCGCTC
ACCGGCGTGA ACGCCGGCTA CGGCAAGGAT CTCCAGAACG GCGTGCAGCT CGCGCTCGAC
GACGCCGCCG CGCAGAAGAT ACAGATCGCC GGCAAACCCG CGCACTTCAA CCTCGTCGTG
CAGGACGATC AGGCCGACCC GCGCATCGGC GTGCAGGCCG CGCAGGCGCT GATCGACCAG
AACGTGTCGG TGGTGGTCGG CCACTTCAAC TCCGGGACGA CGATCCCCGC GTCGGTCGTC
TACGACAAGG CCGGCATCCC GGTGATCGAT CCGGCCGCGA CCAACCCGAC GCTCACGTCG
CGCGGGCTCG CGAACATGTT CATGGTGATC GCGACCGACG GCCAGAACGC CGGCAACGCG
GGCAAGTACG CGGTCGACGT GACCAAGGCG AAGCGCATCG CGATCATCGA CGATCGCACC
GCGTTCGGCC AGGGCGAGGC GGACGAGTTC GAGAAGGCCG TGAAGGCGGC CGGCGGCAAC
ATCATCGGCC GCGAGTTCAC CAGCAACCAG GCGGTCGATT TCCGTGCGCA GATCACGAGT
CTGAAGGGCA AGAACCCCGA CCTGATCTTC TTCGGCGGTC TCGATTCGCT CGCCGCGAAC
TTCATCAAGC AGATGCGCCA GCTCGGGCTG AACGCGAAGT TCGTCGGCGG CGGCGGCGTG
AAGGACAACG AGTTCATCAA GATCGCCGGC CCGGCCGCGG AAGGCGCGAT GGCGTGGGAA
TACGGGCGTC CGCTCGACGA GCTGCCGCAG GGCAAGGATT TCGAGCAGCG GTTCAAGAAG
CGCTTCGGCG TCGACGTGCT GTCGTACGCG CAGTTCGGCT ACGACGCGAC CTGGGCCGCG
ATCAAGGCGA TGCAGGCAGC CAACTCGACC GATCCGAAGG TCTACCGTCC GGCGCTGAAG
AAGATCGACT TCGAGGGCAT CACCGGCCGG ATCTCGTTCG CGAACGACGG CTCGCTGAAG
AGCGGGATGT CGACGCTGTA TCAGGTGAAG AACGGCGCGT GGAAGACGAT CGTGACGAAG
GGAGGCTGA
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| Protein sequence | MKFRHSLLSV SVVSAFALLS QQAARAADAT DVKVGFAAPL TGVNAGYGKD LQNGVQLALD
DAAAQKIQIA GKPAHFNLVV QDDQADPRIG VQAAQALIDQ NVSVVVGHFN SGTTIPASVV
YDKAGIPVID PAATNPTLTS RGLANMFMVI ATDGQNAGNA GKYAVDVTKA KRIAIIDDRT
AFGQGEADEF EKAVKAAGGN IIGREFTSNQ AVDFRAQITS LKGKNPDLIF FGGLDSLAAN
FIKQMRQLGL NAKFVGGGGV KDNEFIKIAG PAAEGAMAWE YGRPLDELPQ GKDFEQRFKK
RFGVDVLSYA QFGYDATWAA IKAMQAANST DPKVYRPALK KIDFEGITGR ISFANDGSLK
SGMSTLYQVK NGAWKTIVTK GG
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