Gene BamMC406_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1046 
Symbol 
ID6176408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1137573 
End bp1138334 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID641680802 
ProductGntR domain-containing protein 
Protein accessionYP_001807753 
Protein GI172060101 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC CCACGCTTCC CGCTGCGCCG CGCCGTCGCG CACGCAGCCT CGCACAAGAT 
GTCGTCGACG CGCTGACCGC GCAGATCGAA AACGGCACGC TGCGTCCCGG TGACAAGCTG
CCGACCGAAA CCGAAGTCAT GGCGGCTCAG GGCGTCAGCC GCACGGTCGT GCGCGAAGCG
ATCTCGCGGA TGCAGGCGAG CCACCTCATC GAGACGCGCC ACGGCATCGG CAGCTTCGTG
CTCGAACCGT CGCGCCGCCA GGCGCTCGGC ATCGATCCCG CGACCATCAT GACGCTGCGC
GACGTGCTCG CGGTGCTCGA GCTGCGCATC AGCCTTGAAA GCGAATGCGC GAGCCTCGCC
GCGCAGCGCG CGAACGACAC CGACCTCGCC GCGCTGCGGC GTGCGCTCGA TGCGATCGCG
TCGGGGGCGG GCGGCGGACG CGACACGGCG CAGCTCGACT TCAACTTCCA CCTGCAGATC
GCGCAGTCCA CCGGCAACCG CTACTTCGTC GACATCATGA CGCAGCTCGG CGCGTCGATC
ATCCCGCGCA CGCGCGTGAA TTCGGCACGC TTCGCCGGCG ACGACCTCGA GCGCTATGTC
GGCCGGCTCA ATCACGAGCA CGAGGACATT TACGAGGCGA TCGCGCGTCA CGATCCGGAA
GCCGCGCGCG CCGCGATGCG CACTCACCTG ACCAACAGTC GCGAGCGGCT GCGCCGCGCA
CACGAGGCGG CCGAGGCGGA ACGCGACACG CAGGCGAGCT GA
 
Protein sequence
MSVPTLPAAP RRRARSLAQD VVDALTAQIE NGTLRPGDKL PTETEVMAAQ GVSRTVVREA 
ISRMQASHLI ETRHGIGSFV LEPSRRQALG IDPATIMTLR DVLAVLELRI SLESECASLA
AQRANDTDLA ALRRALDAIA SGAGGGRDTA QLDFNFHLQI AQSTGNRYFV DIMTQLGASI
IPRTRVNSAR FAGDDLERYV GRLNHEHEDI YEAIARHDPE AARAAMRTHL TNSRERLRRA
HEAAEAERDT QAS