Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1046 |
Symbol | |
ID | 6176408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1137573 |
End bp | 1138334 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680802 |
Product | GntR domain-containing protein |
Protein accession | YP_001807753 |
Protein GI | 172060101 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTGC CCACGCTTCC CGCTGCGCCG CGCCGTCGCG CACGCAGCCT CGCACAAGAT GTCGTCGACG CGCTGACCGC GCAGATCGAA AACGGCACGC TGCGTCCCGG TGACAAGCTG CCGACCGAAA CCGAAGTCAT GGCGGCTCAG GGCGTCAGCC GCACGGTCGT GCGCGAAGCG ATCTCGCGGA TGCAGGCGAG CCACCTCATC GAGACGCGCC ACGGCATCGG CAGCTTCGTG CTCGAACCGT CGCGCCGCCA GGCGCTCGGC ATCGATCCCG CGACCATCAT GACGCTGCGC GACGTGCTCG CGGTGCTCGA GCTGCGCATC AGCCTTGAAA GCGAATGCGC GAGCCTCGCC GCGCAGCGCG CGAACGACAC CGACCTCGCC GCGCTGCGGC GTGCGCTCGA TGCGATCGCG TCGGGGGCGG GCGGCGGACG CGACACGGCG CAGCTCGACT TCAACTTCCA CCTGCAGATC GCGCAGTCCA CCGGCAACCG CTACTTCGTC GACATCATGA CGCAGCTCGG CGCGTCGATC ATCCCGCGCA CGCGCGTGAA TTCGGCACGC TTCGCCGGCG ACGACCTCGA GCGCTATGTC GGCCGGCTCA ATCACGAGCA CGAGGACATT TACGAGGCGA TCGCGCGTCA CGATCCGGAA GCCGCGCGCG CCGCGATGCG CACTCACCTG ACCAACAGTC GCGAGCGGCT GCGCCGCGCA CACGAGGCGG CCGAGGCGGA ACGCGACACG CAGGCGAGCT GA
|
Protein sequence | MSVPTLPAAP RRRARSLAQD VVDALTAQIE NGTLRPGDKL PTETEVMAAQ GVSRTVVREA ISRMQASHLI ETRHGIGSFV LEPSRRQALG IDPATIMTLR DVLAVLELRI SLESECASLA AQRANDTDLA ALRRALDAIA SGAGGGRDTA QLDFNFHLQI AQSTGNRYFV DIMTQLGASI IPRTRVNSAR FAGDDLERYV GRLNHEHEDI YEAIARHDPE AARAAMRTHL TNSRERLRRA HEAAEAERDT QAS
|
| |