| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1039 |
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| Symbol | |
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| ID | 6176478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1128449 |
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| End bp | 1129201 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680795 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001807746 |
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| Protein GI | 172060094 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.234705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCG TTCCGGCTTC CCTGTCCCTG ACCGATACCG CGTTCTTTTT CGACTTCGAC
GGTACGCTCG TCGAACTGGC GCCGACGCCC GACAGCATTC ACGTGCCGCC GTCGCTGCTG
ACGCTGCTCG ATGAACTGCG GCGCCGCTCG CATGGCGCGC TCGCCGTCGT GTCGGGTCGC
GGCATCGACA ACCTCGACGC GTTCCTGAAC ATGCCGGACC TGCCGATCGC CGGCCTGCAC
GGCGCCGAGC GTCGCGACGC GAACGGCGAC ACGCAGCGCA TCGGCTTCAA CGACGACCGG
CTGCTGCGCA TCGAGCGCGA ACTCGCGTCC GTCGTCGACC GTCATCCGGG CATGCTGCTC
GAAATCAAGG GGGCGGCCGT CGCGCTGCAT TACCGAAATG CACCCGAGCG CGAGCCGGCC
GCGCGCGAAG CGGCCGAGCG TCTCGTCGCC GAATATGCGG ACGCGTATGT GCTGCAGCCG
GGCAAGATGG TGTTCGAGAT CAAGCCCAAG GGTGTCGACA AGGGGCGCGC GCTGGCCGCG
TTCCTCGACG AGCCGCCGTT CGCGGGGCGC GTGCCGCTGT TCGCGGGCGA CGACCTGACC
GACGAGAAGG GCTTCGCGGT GGTCAACGCG CGTGGCGGTC TGTCGATCAA GGTCGGCGCG
GGCGAGACGT CGGCACGCAT GCGGCTCGAC TCGGTCGACG CGCTGCACGC GCAGATTGCC
CGCTGGCTTG GCGCGGAGCA GCGGGGCGCA TGA
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| Protein sequence | MQSVPASLSL TDTAFFFDFD GTLVELAPTP DSIHVPPSLL TLLDELRRRS HGALAVVSGR
GIDNLDAFLN MPDLPIAGLH GAERRDANGD TQRIGFNDDR LLRIERELAS VVDRHPGMLL
EIKGAAVALH YRNAPEREPA AREAAERLVA EYADAYVLQP GKMVFEIKPK GVDKGRALAA
FLDEPPFAGR VPLFAGDDLT DEKGFAVVNA RGGLSIKVGA GETSARMRLD SVDALHAQIA
RWLGAEQRGA
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