Gene BamMC406_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1032 
Symbol 
ID6177230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1123010 
End bp1123513 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID641680788 
Productputative GAF sensor protein 
Protein accessionYP_001807739 
Protein GI172060087 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.936669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGC TGTCAAACGA CCCTCACGCC TCCAAGGCCG AACTCTATGC GACGCTCGTC 
GAGCAGGCAC GCGCGCTCGT CGAATCGGAA CGCGACCTGA CCGCGAACGC CGCGAACTTC
TCCGCGCTCG TCTATCACTC GCTCGACCGC CTGAACTGGG CCGGCTTCTA TTTCTTCGAC
GGATCGGAAC TCGTGGTCGG CCCGTTCCAG GGCAAGCCCG CGTGCGTGCG GATCGCGCTC
GGCAAGGGCG TGTGCGGCAC GGCCGCGCAG ACCCGCGAGA CGCAGGTCGT GCGCGACGTG
CATGAATTCC CGGGCCATAT CGCGTGCGAT GCCGCGTCCG AATCGGAGAT CGTCGTGCCG
CTGGTGGCCG CCGACGGCAC GCTGATCGGC GTGTGGGACG TCGACAGCCC CGTTGCCGCA
CGTTTCGACG ACGAGGACCG CAACGGGATG GAAGCGCTGT GCCGTGTGTT CGTCGAACAC
GCGTGGCAGA AGGCGCGCGG TTAA
 
Protein sequence
MFTLSNDPHA SKAELYATLV EQARALVESE RDLTANAANF SALVYHSLDR LNWAGFYFFD 
GSELVVGPFQ GKPACVRIAL GKGVCGTAAQ TRETQVVRDV HEFPGHIACD AASESEIVVP
LVAADGTLIG VWDVDSPVAA RFDDEDRNGM EALCRVFVEH AWQKARG