Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1032 |
Symbol | |
ID | 6177230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1123010 |
End bp | 1123513 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680788 |
Product | putative GAF sensor protein |
Protein accession | YP_001807739 |
Protein GI | 172060087 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.936669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGC TGTCAAACGA CCCTCACGCC TCCAAGGCCG AACTCTATGC GACGCTCGTC GAGCAGGCAC GCGCGCTCGT CGAATCGGAA CGCGACCTGA CCGCGAACGC CGCGAACTTC TCCGCGCTCG TCTATCACTC GCTCGACCGC CTGAACTGGG CCGGCTTCTA TTTCTTCGAC GGATCGGAAC TCGTGGTCGG CCCGTTCCAG GGCAAGCCCG CGTGCGTGCG GATCGCGCTC GGCAAGGGCG TGTGCGGCAC GGCCGCGCAG ACCCGCGAGA CGCAGGTCGT GCGCGACGTG CATGAATTCC CGGGCCATAT CGCGTGCGAT GCCGCGTCCG AATCGGAGAT CGTCGTGCCG CTGGTGGCCG CCGACGGCAC GCTGATCGGC GTGTGGGACG TCGACAGCCC CGTTGCCGCA CGTTTCGACG ACGAGGACCG CAACGGGATG GAAGCGCTGT GCCGTGTGTT CGTCGAACAC GCGTGGCAGA AGGCGCGCGG TTAA
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Protein sequence | MFTLSNDPHA SKAELYATLV EQARALVESE RDLTANAANF SALVYHSLDR LNWAGFYFFD GSELVVGPFQ GKPACVRIAL GKGVCGTAAQ TRETQVVRDV HEFPGHIACD AASESEIVVP LVAADGTLIG VWDVDSPVAA RFDDEDRNGM EALCRVFVEH AWQKARG
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