Gene BamMC406_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1028 
Symbol 
ID6176845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1120497 
End bp1121045 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID641680784 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001807735 
Protein GI172060083 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.517814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCC CGAAACAGCG TGACGACGTG CGCCTGATCG ATTGCAGCGA GGCCGAGCAC 
GCCGCGGCCA TCCTCGAGAT CCTGAACGAT GCAATCGTGA ACTCGACCGC GCTGTACGAC
TACCGGCCGC GGCCGCCCGA AGCGATGGTC GCGTGGTTCG CGACGAAACG CGCCAACGGC
TTTCCGGTCG TCGGCGCGGT CGATGAATCG GGCACGCTGG TCGGCTTCGC GAGCTGGGGC
ACGTTCCGCG CGTTTCCGGC GTTCAAGTAC ACGGTCGAAC ACAGCGTCTA CGTGCACCGC
GACCATCGCG GCCGCGGGCT CGGGGAGCTG CTGCTGCGCG AATTGATCCG GCGTGCACGC
GAAGCCGACG TGCACGTGCT CGTCGGTTGC ATCGACGCCA CCAACGGCGG CAGCGTCGCG
CTGCATACGC GCCTCGGCTT CGTGCACTCG GGCACGATCA CCGAAGCGGG CTTCAAGTTC
GGCCGCTGGC TCGATGCGGC GTTCTACCAG TTGACGCTCG ACACCCCCGC GCAGCCGGTG
GATGGCTGA
 
Protein sequence
MNSPKQRDDV RLIDCSEAEH AAAILEILND AIVNSTALYD YRPRPPEAMV AWFATKRANG 
FPVVGAVDES GTLVGFASWG TFRAFPAFKY TVEHSVYVHR DHRGRGLGEL LLRELIRRAR
EADVHVLVGC IDATNGGSVA LHTRLGFVHS GTITEAGFKF GRWLDAAFYQ LTLDTPAQPV
DG