Gene BamMC406_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1024 
Symbol 
ID6177309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1115692 
End bp1116279 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID641680776 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_001807731 
Protein GI172060079 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.620962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCA ATTTCCCGAT TTTCCTGACG TGGGTCCGGA TCGTGCTGAT TCCGCTCGTC 
GTCGGCGTGT TCTATCTGCC GGACACGGTG ATGGGCGGCG CGCACCGCAA CCTCGCGGCA
GCGGCGATCT TCATCCTCGC CGCGCTGACC GATTGGTTCG ACGGGTTTCT CGCCCGCAAG
TGGAACCAGA CGTCGTCGTT CGGCGCGTTC CTCGATCCGG TCGCGGACAA GCTGATGGTG
ACGGCCGCGC TGCTGATCCT CGTGCAGATT TCACGGGTCG ATGCGGCGAT CGCGCTGGTG
ATTGTCGGTC GCGAGATCGC GATCTCGGCG CTGCGCGAGT GGATGGCCCA GATCGGCGCA
TCGAAGAGCG TCGCGGTGAA CCAGCTCGGC AAGTTCAAGA CCGCGTGCCA GATGGTCGCG
ATTCCGATGC TGCTGTACTA CGGTCCGCTG CCCCTCGGCA TCGCGACGAT CGACACGCGC
GTGTGGGGCG AGTGGCTGAT GTATCTCGCG GCGGTGCTGA CGATCTGGTC GATGCTGTAC
TACATGAAGC TCGCATGGCC GCAGATCCGC GAGCGCGGCG GCGCGTGA
 
Protein sequence
MPFNFPIFLT WVRIVLIPLV VGVFYLPDTV MGGAHRNLAA AAIFILAALT DWFDGFLARK 
WNQTSSFGAF LDPVADKLMV TAALLILVQI SRVDAAIALV IVGREIAISA LREWMAQIGA
SKSVAVNQLG KFKTACQMVA IPMLLYYGPL PLGIATIDTR VWGEWLMYLA AVLTIWSMLY
YMKLAWPQIR ERGGA