Gene BamMC406_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1022 
Symbol 
ID6177041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1112267 
End bp1113454 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID641680774 
Producthypothetical protein 
Protein accessionYP_001807729 
Protein GI172060077 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA CCGCCTCCGC TTCCGCTTCA CCGCTCGCGC CCGACGAACC GATCGCATGC 
GACCTCTTCT GCACCGTGAT CGACAACTTC GGCGACGTCG GCGTGTGCTG GCGCCTCGCG
CGCCAGCTCG CGCACGAACA CGGCTGGCAG GTGCGCCTCT TCATCGACGA CCTGCACACG
TTCGCGCGGC TGCTGACGGG AGTCGATCCC GAGGCGGCCC GGCAGACGCT CGACGGCATC
GTGGTCGAAC ACTGGCATGC GGAAGTCGGC GACGCGCTAG AGATCGCCGA TGTCGTGATC
GAGGCGTTCG CGTGCGAGCT GCCCGGCGCG TATCTCGCGG CGATGGCCAG CCGCACGCGC
CGCCCCGTGT GGATCAATCT CGAATATCTG AGCGCCGAGG ACTGGGTCGC CGATTTCCAT
TTGCGGCCGT CGCCGCATCC GCGCTACCCG TTGCTGAAGA CGTTCTTCTT TCCGGGGCTG
TCGGCCGGCA CGGGCGGCGT GCTGAAAGAA CGCGACCTCG ACGCGCGCCG GACGGCCTTC
GAAGCCGACG CGGCGGCGCG TGCCGCGTGG TGGCGGCAGG CGACCGGCGA CGCGCCGCCG
GCGCCCGGCA CGACGGTCGT CAGCCTGTTC GCGTATGAAA ATCCGGCCGC CGACGCGCTG
CTCGCGCAGT GGCGCGACAG CCCGTCGCCC GTCGTCGCGC TCGTGCCGGC CGGCCGCGTG
TCTCCGGCCG TCGCGCGCTT TTTCGGGGTC GAATCGTTCG GGGCCGGCGC ACGGGCGACG
AGCGGCAACC TGACCGCATA CGGGCTCGCA TTCGTCCCGC AGGCCGACTA TGACCCTTTG
CTGTGGGTGG CCGACGTCAA TTTCGTGCGT GGCGAGGATT CGTTTGTCCG CGCGCAATGG
GCGCGCAAGC CGTTCGTGTG GCACATCTAC CCGCAGGCCG ACGATGCGCA TCTGCCGAAG
CTCGACGCCG CGCTCGCGCA CCTGTCGGCC GGCCTCGCCG ACGCGCCGCG CACGGCGCTC
GAGCGCTTCT GGCATGCGTG GAATGGCGCC GGCACACCCG ATTGGGGCGA TTTGCTCCAG
CATCGTGCCG CACTCGACGC CAACGCGGCC CGCTGGGCCG ATGCACTGGC GAGCGTCGGC
GATCTCGCCG GAAAGCTGGC GGAATTCGCA AAATCTCAGT TAAAATAA
 
Protein sequence
MPRTASASAS PLAPDEPIAC DLFCTVIDNF GDVGVCWRLA RQLAHEHGWQ VRLFIDDLHT 
FARLLTGVDP EAARQTLDGI VVEHWHAEVG DALEIADVVI EAFACELPGA YLAAMASRTR
RPVWINLEYL SAEDWVADFH LRPSPHPRYP LLKTFFFPGL SAGTGGVLKE RDLDARRTAF
EADAAARAAW WRQATGDAPP APGTTVVSLF AYENPAADAL LAQWRDSPSP VVALVPAGRV
SPAVARFFGV ESFGAGARAT SGNLTAYGLA FVPQADYDPL LWVADVNFVR GEDSFVRAQW
ARKPFVWHIY PQADDAHLPK LDAALAHLSA GLADAPRTAL ERFWHAWNGA GTPDWGDLLQ
HRAALDANAA RWADALASVG DLAGKLAEFA KSQLK