Gene BamMC406_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1015 
Symbolera 
ID6177054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1105739 
End bp1106602 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID641680767 
ProductGTP-binding protein Era 
Protein accessionYP_001807722 
Protein GI172060070 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA TCGTGGGCCG CCCGAACGTC GGCAAGTCGA CGTTGATGAA CGCACTCGTC 
GGCCAGAAGA TCAGCATCAC GTCGCGCAAG GCGCAAACGA CCCGCCATCG CATCACCGGC
ATCAACACGT TCGACGACGC GCAATTCGTA TTCGTCGACA CGCCGGGCTT CCAGACCCGT
CACAGCACCG CGCTGAACCG CTCGCTGAAC CGCGCGGTCA CGTCGACGCT CACGTCGGTC
GACGTGATCC TGTTCGTGAT CGAGGCCGGC CGCTTCGGGC CCGACGACCA GAAGGTGCTC
GACCTGATCC CGCCCGGCAT GCCGACGCTG CTGATCGCGA ACAAGATCGA CCGCGTGACC
GACAAGGCGA CGCTGTTCCC GTTCATGCAG CAGATGAGCG GACTGCGCGA ATTCACCGAA
CTCGTGCCGC TGTCGGCGCA GCGGCCGGAA GACATCAAGC GCCTGCTCGA CACGATCAAG
CCGTACCTGC CGGAAGGCGA GCCGATCTAC GGCGAGGACG AACTGACCGA CCGCAGCTCG
CGCTTTCTCG CGGCCGAAAT CCTGCGCGAG AAGGTGTTCC GCTGGACCGG GGACGAACTG
CCGTACACGA GCACCGTGCT GATCGACAAG TTCGAGGAGG AAGGGCGCCT GAAGCGCATC
TTCGCGACGA TCCTCGTCGA ACGCGATTCG CACAAGGCGA TGGTGATCGG CAAGAAGGGC
GAGAAGCTCA AGCAGATCAG CACCGAGGCG CGGATGGACA TGGAGAGGCT GTTCGACGGC
CCCGTGTATC TCGAGACCTT CGTGAAGGTG AAGAGCGGCT GGGCCGACAA CGAGGCGGGG
CTGCGCGCCT ATGGGTACGA ATGA
 
Protein sequence
MIAIVGRPNV GKSTLMNALV GQKISITSRK AQTTRHRITG INTFDDAQFV FVDTPGFQTR 
HSTALNRSLN RAVTSTLTSV DVILFVIEAG RFGPDDQKVL DLIPPGMPTL LIANKIDRVT
DKATLFPFMQ QMSGLREFTE LVPLSAQRPE DIKRLLDTIK PYLPEGEPIY GEDELTDRSS
RFLAAEILRE KVFRWTGDEL PYTSTVLIDK FEEEGRLKRI FATILVERDS HKAMVIGKKG
EKLKQISTEA RMDMERLFDG PVYLETFVKV KSGWADNEAG LRAYGYE