| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1014 |
|---|
| Symbol | |
|---|
| ID | 6177161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1104365 |
|---|
| End bp | 1105642 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680766 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001807721 |
|---|
| Protein GI | 172060069 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCAT CCCAGTTGGA AAGCCGGCTG CGCTACGAAT TTCGCAATGC GGAATTGTTG
CGCCAGGCTT TGACCCACCG CAGTCACAGT GCCACGCATA ACGAACGGCT CGAGTTTCTC
GGCGATTCCG TTCTGAATTG CGCGGTGGCC GCCCTTTTGT TCCAGCGTTT CAGCAAGCTG
GACGAAGGCG ACCTGTCGCG CGTGCGCGCC AATCTCGTCA AGCAGCAGTC GCTGTATGAA
ATCGCTCAGG CCCTGAATAT CTCCGAGGGG TTGCGGTTGG GCGAGGGCGA ACTGCGCAGC
GGCGGCTTCC GCCGCCCGTC GATCCTCGCG GACGCGTTCG AAGCCATCAT CGGGGCCGTA
TTCCTCGATG GCGGCTTCGA AGCCGCCCAA GGGGTCATCA AGCGCCTCTA TATCCCGATT
CTCGACCACA TCGATCCGCG CACGCTCGGC AAGGACGCGA AGACGCTGCT GCAGGAATAC
CTGCAGGGGC ACAAGATCGC GCTGCCGACC TACACGGTCG TCGCGACGCA TGGTGCGGCG
CACAATCAGC AGTTCGAGGT CGAATGCACG GTGCCGAAGC TCGACGTGAA GGTGTCGGGC
TCCGGCGCGA GCCGGCGGGC AGCCGAGCAG GCGGCCGCGA AGAAGGCGCT CGACGAGGTG
CTGGCGGCCG CGCCGATGCT GGCCGCGAAG CCGAAGCGTT CGAAGAACGC ACGAGGATCG
AAGCACGTCG AGCCCGAAAT CGTGCCGGGC GTGAAGGGTG TGCAGGAAGC GCTCGACCTG
CGTTCTCCGG AACGCAAGGA GCGTGCGGCG GCGCGCGACG CGAAGGCGGC CGCGGCGGCG
CTTGCAGCGA CCGACGCCGA CGCGCCGCCG AGTGAGCGAC CGACGCCGAC GCCGATGGCC
GCGATTCGCG CGGCGCATGT GGAAACGGTC GCGGACAAGG GTGACCGTGC CACGAAGCCG
ACGGCCGACA AACCTGCCGA GAAGGCGTCC GACAAGCCGT CGGATCGCGG CGAAACCGGC
TCGCGCGCGG CGGACAAGCC GGCCGAGCGT GCCGACAAGC CCGCGGAAAG CGCAGGCGCA
CCCCGTGCAG CCGACAAGCC CGCGAGCCAG GCGGCCGATC CGGCCGTGTC GTCAACGGAC
AAGCCGGCTG CCGGTCCCGA TGCTGCCACG CGCGCGACGC CGCGCGCCCG CGACGCCGCG
GCGCCCGATG CCGAGACGCC GCCGGGCGGC GCGACCCTCG CCGCCGCGCA GGCGCGCGCG
GCCGATGCCG ACCACTGA
|
|---|
| Protein sequence | MPPSQLESRL RYEFRNAELL RQALTHRSHS ATHNERLEFL GDSVLNCAVA ALLFQRFSKL
DEGDLSRVRA NLVKQQSLYE IAQALNISEG LRLGEGELRS GGFRRPSILA DAFEAIIGAV
FLDGGFEAAQ GVIKRLYIPI LDHIDPRTLG KDAKTLLQEY LQGHKIALPT YTVVATHGAA
HNQQFEVECT VPKLDVKVSG SGASRRAAEQ AAAKKALDEV LAAAPMLAAK PKRSKNARGS
KHVEPEIVPG VKGVQEALDL RSPERKERAA ARDAKAAAAA LAATDADAPP SERPTPTPMA
AIRAAHVETV ADKGDRATKP TADKPAEKAS DKPSDRGETG SRAADKPAER ADKPAESAGA
PRAADKPASQ AADPAVSSTD KPAAGPDAAT RATPRARDAA APDAETPPGG ATLAAAQARA
ADADH
|
|---|
| |