Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1013 |
Symbol | |
ID | 6178371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1103311 |
End bp | 1104204 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641680765 |
Product | signal peptidase I |
Protein accession | YP_001807720 |
Protein GI | 172060068 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTG CGCTGATTCT TTTTGTGCTC GTCGTCGTGA CGGGCGTAGC GTGGGTGTTG GACAAACTGG TGTTCCTGCC GCGGCGACGC AAGGCGGCCG ACGTGGCGAT CGAAGAGTTC GATCGCCAGC AGTCGCGCAT CGACAAGCGT TTCGCGGACG AAAACGCGGT GCAGACGCGC TCGAAGCTGC GCGACGAAAA GCTGCGCCAG CCATGGTGGC TCGAGTACAC CGCGAGCTTC TTCCCGGTGA TCCTGGCCGT GTTCGTCGTG CGTTCGTTCA TCGTCGAGCC GTTCAAGATC CCTTCGGGCT CGATGGTGCC GACGCTGCTG GTCGGCGACT TCATCCTCGT CAACAAGTTC GAATACGGCC TGCGCCTGCC GATCACGAAC ACGAAGATCA CGCAGGGCAG CCCGCTGTCG CGCGGCGACG TCGTCGTGTT CCGCTATCCG AAGGACGAGT CGGTCGATTA CATCAAGCGC GTGATCGGCC TGCCGGGCGA CACGGTCGCC TACCAGGACA AGCAGCTGAC GATCAACGGC CAGCCGGTGC CCGAAGCGCC GCTGCCGGAT TTCTTCGACG ACGAGCGCCA GAACTACGCG AAGCAGTTCG AGGAAACGAT CGGCACGAAG AAGAATGCGA TCCTCAACAA TCCCGCCGTG CCGCCGTTCG TGATGGGCGC CTACGACTAT CCGTATCGCG ACAATTGCAC GTACAACAGC CGCGGCGTGA TCTGCAAGGT GCCGCCGGGT CACTACTTCA TGATGGGCGA CAACCGCGAC AACAGCGCGG ACAGCCGCTA CTGGGGTTTC GTGCCGGACA ACAACATCGT CGGCCGCGCG TTCTTCATCT GGATGAACTT CGGCGACCTG AAGCGGATCG GTTCCTTCAA CTGA
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Protein sequence | MNFALILFVL VVVTGVAWVL DKLVFLPRRR KAADVAIEEF DRQQSRIDKR FADENAVQTR SKLRDEKLRQ PWWLEYTASF FPVILAVFVV RSFIVEPFKI PSGSMVPTLL VGDFILVNKF EYGLRLPITN TKITQGSPLS RGDVVVFRYP KDESVDYIKR VIGLPGDTVA YQDKQLTING QPVPEAPLPD FFDDERQNYA KQFEETIGTK KNAILNNPAV PPFVMGAYDY PYRDNCTYNS RGVICKVPPG HYFMMGDNRD NSADSRYWGF VPDNNIVGRA FFIWMNFGDL KRIGSFN
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