| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1009 |
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| Symbol | |
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| ID | 6176338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1098475 |
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| End bp | 1099527 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680761 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001807716 |
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| Protein GI | 172060064 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.597647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACAT TGCAGTTGAA TCACGCCATC TCCGGATGGA AGCGGCTGCC GGCCCTCCTG
CTTTGCGCAG CCGCCCTGTT GTCCGTTCAA TCCCTTCCCG CCAGCGCCCA GCAACCGGAC
GATCCCGTCG CGACCCGCAA GGGTGCGGCG GAGTGGCTCG ACCGCATCCA GCAGGCGGCG
CAGCAGCAGA GCTACGAGGG CACCTTCGTC TACCAGCGCG GCGGGTATGT CCAGTCGTCG
CGCATCGCGC ACGTGGCGTC CCGCGACGGC GAGTTCGAGC GGATCGAGAC GCTCGACGGC
AAGCCGCGCA AGGTGCTGCG GCATAACGAC GAGCTGTATA CGTTCGTGCC GGAGCGCAAG
CTGTGCGTGG TCGAGCGCCG CCAGACGCGC GACTCGTTTC CATCGCTGCT CGGCGCGGGC
GGCGACCACG TGATGTCCGT CTACGACGCG AAGCTGCTCG GCAAGGACCG CGTGGCGGGG
CTCGACGCGC AAGTCGTCGA ACTCGTGCCG AAGGATGCGT ACCGCTTCAC GTACAAGCTG
TGGTCCGATG CCCGGACGGG CCTGCTGCTG CGTTCGCAGA CGCTCGACGC GGCCGATCAC
GTGCTCGAGC AGATCGCGTT CTCGCAAGTG CAGACGGGCG GCACGTCCGG CGACAAGGCC
GCGATCGCGG CCGGCATGCG CAACCTGAGC GGCTGGACGG TGGTCCGCCC GCCGGTCGCG
ACGGTCGACA TGGAAGCGCA GGGCTGGCAG ATCGCGCCGA ACGTCGCCGG CTTCCGGAAG
ATTCGCGAGG TGCGCCGCCC GATGGCCGCG CGCGACGCCG GCGATCCGCC GATTCCGGTC
GACCAGGCCG TCTTCACCGA CGGGCTCGCG ACGATCTCCG TCTTCATCGA GCCGGCCGAA
AAGAACACGC GCAAGGAAGG CGCGGGCAGC ACCGGTGCGA CCCACGTTCT CGTGAAGCGT
CGCGGCGACT ACTGGATCAC CGTGCTCGGC GAAGTGCCGC CGGCCACGTT GCAGCAGTTC
GCGGCTGCCA TAGAATACAA GGCTTCCAAG TAA
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| Protein sequence | MRTLQLNHAI SGWKRLPALL LCAAALLSVQ SLPASAQQPD DPVATRKGAA EWLDRIQQAA
QQQSYEGTFV YQRGGYVQSS RIAHVASRDG EFERIETLDG KPRKVLRHND ELYTFVPERK
LCVVERRQTR DSFPSLLGAG GDHVMSVYDA KLLGKDRVAG LDAQVVELVP KDAYRFTYKL
WSDARTGLLL RSQTLDAADH VLEQIAFSQV QTGGTSGDKA AIAAGMRNLS GWTVVRPPVA
TVDMEAQGWQ IAPNVAGFRK IREVRRPMAA RDAGDPPIPV DQAVFTDGLA TISVFIEPAE
KNTRKEGAGS TGATHVLVKR RGDYWITVLG EVPPATLQQF AAAIEYKASK
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