Gene BamMC406_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1003 
SymbolfabG 
ID6179075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1094068 
End bp1094817 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID641680755 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001807710 
Protein GI172060058 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CTCTCGATAA ACAGGTCGCG ATCGTGACCG GCGCATCGCG TGGCATCGGC 
CGTGCGATTG CGCTCGAACT CGCGCGCCTG GGCGCGACGG TGATCGGCAC CGCGACGAGC
GAATCGGGCG CCGCCGCGAT TACCGCCGGG TTCGCGGAAG CGGGCGTGAC GGGCCGCGGC
GCGGTGCTGA ACGTCAACGA CGCGGCGGCC GCCGAAGCGC TGATCGACGC GACCGTGAAG
GAGTTCGGCG CGCTCCACGT GCTCGTGAAC AACGCCGGGA TCACGCAGGA CCAGCTCGCG
ATGCGCATGA AGGACGAGGA CTGGGACGCG GTCATCGACA CCAACCTGAA GTCGGTGTTC
CGCCTGTCGC GTGCGGTGCT GCGGCCGATG ATGAAGGCCC GCGGCGGCCG CATCATCAAC
ATCACGTCGG TGGTCGGTTC GGCCGGCAAC CCGGGCCAGG TCAACTACGC GGCCGCGAAG
GCCGGCGTCG CGGGCATGAC CCGCGCGCTC GCGCGCGAAA TCGGCAGCCG TGGCATCACG
GTGAACTGTG TCGCGCCGGG CTTCATCGAC ACCGACATGA CGAAGACCCT GCCGGAAGAA
CAGCAGGCCG CGCTCAAGAC CCAGATTCCG CTCGGCCGAC TCGGCAGCCC GGAAGACATC
GCCCATGCCG TCGCGTTCCT CGCATCGCCG CAGGCCGGTT ACATCACCGG CACGACGCTG
CACGTGAACG GCGGCATGTA CATGTCGTAA
 
Protein sequence
MEKTLDKQVA IVTGASRGIG RAIALELARL GATVIGTATS ESGAAAITAG FAEAGVTGRG 
AVLNVNDAAA AEALIDATVK EFGALHVLVN NAGITQDQLA MRMKDEDWDA VIDTNLKSVF
RLSRAVLRPM MKARGGRIIN ITSVVGSAGN PGQVNYAAAK AGVAGMTRAL AREIGSRGIT
VNCVAPGFID TDMTKTLPEE QQAALKTQIP LGRLGSPEDI AHAVAFLASP QAGYITGTTL
HVNGGMYMS