Gene BamMC406_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0996 
Symbol 
ID6178755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1088269 
End bp1088991 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID641680748 
Producturoporphyrin-III C/tetrapyrrole methyltransferase 
Protein accessionYP_001807703 
Protein GI172060051 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG GCACACTTTA TCTCGTCCCG AACACCCTCG GCGAAGGCGA CGAATCGATG 
CTCGCCGCCG TGCTGCCCGC GGCCGTGCAG GCGCGCGCCG GCACGCTCGG CTATTACATC
GGCGAAAACG CGAAAACGAC CCGCGCGTTC CTGAAGAAGA TCGGCACCAC GCGGCCGATC
CAGGAAATTG GGATCCGCGA GCTGAACGTC AACACGCCGG CCGGCGAGAT CGACAAGCTG
CTCGCACCGG TGCTCGCGGG CACGGACGCC GGGCTCGTGT CCGAGGCCGG CTGCCCCGCG
GTGGCCGACC CCGGCGCGTT GCTGGTGCGC CGTGCGCATG AACGCGGCGT GAAGGTCGTG
CCGCTCGTCG GGCCGAGTTC GATCCTGCTC GCGCTGATGG CGTCGGGCCT GAACGGCCAG
AGTTTCGCGT TCAACGGCTA TCTGCCGGTC GATGCGGCCG CGCGCGCGAA ACGCCTGCGC
GAGCTCGAGC AACTATCGCG CAAGGGCCGC CAGACGCAGA TATTCATCGA GACGCCGTAC
CGGAACCAAG CGATGCTCGA TACGCTTGTC GCGACCTGCG CGCCGTCGAC GCAGATCTGC
GTCGCGGCCG ACCTGACCCT CGAAACCGAG ACGATCGCCA GCCGCTCGGT GGCGGACTGG
AAAAAAGCGC CTGCGCCGAA TCTGCACAAG CGCCCCGCCA TCTTCCTGCT GCTCGCGAAC
TGA
 
Protein sequence
MTAGTLYLVP NTLGEGDESM LAAVLPAAVQ ARAGTLGYYI GENAKTTRAF LKKIGTTRPI 
QEIGIRELNV NTPAGEIDKL LAPVLAGTDA GLVSEAGCPA VADPGALLVR RAHERGVKVV
PLVGPSSILL ALMASGLNGQ SFAFNGYLPV DAAARAKRLR ELEQLSRKGR QTQIFIETPY
RNQAMLDTLV ATCAPSTQIC VAADLTLETE TIASRSVADW KKAPAPNLHK RPAIFLLLAN