| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0976 |
|---|
| Symbol | |
|---|
| ID | 6176351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1066225 |
|---|
| End bp | 1066998 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641680726 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_001807683 |
|---|
| Protein GI | 172060031 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000153015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGC GTCCCTTGAA TCCCTCATCC ACACCGTCGC CCCCGCCGCG CCGTCCGTTC
AACGAATGGC TCGACGGCGC GCGCGACACA ATCCCGATGA TGATCGGCGC GGCGCCGTTC
GGCGTGATCT TCGGCACGCT CGTCGCCGGC GGGCCGCTGG CCGCCTGGCA CGGCACGCTG
ATGTCGCTCG CGGTGTTCGC GGGCTCCGCG CAGTTCATCG CGCTCGGCCT GATCGCCGGC
AGCGCGAGCT TCGTCGTCGT GCTCGCAACG ACGCTGATCG TGAACCTGCG TCACCTGCTG
TACAGCGCCA CGCTCGCGCC GTACGTCGCA CACCTGCCGC TGCGCTGGCG CGCGACGCTC
GGCGCGCTGC TGACCGACGA AGTGTTCGCG GTCGCCTACT CGCACTACCG GCACTTCCCG
CCCGGTGCGA TCGGCCCCCA CTACTTCTTC GGTTCGGGCC TCGCGATGTA CCTGAACTGG
CAGGTCTGGA CGCTCGCGGG CATTGGCTTC GGCGCGGCCT TCCCCGGCCT CCAGTCACTC
GGCCTCGATT TCGCGATGGC GGCGACCTTC ATCGCGATCG TCGTCCCGCA GCTCGGCAAG
CTGCGCTATT TCGCGGCCGC CGCGACAGCC GGCACGCTCG CGTACTTCTG GCAGGGCTGG
CCGTACAAGC TCGGGTTGTT GGGCGCGGTC GCCGCCGGCG TCGTAGTCGG TGTCGCGCTC
ACGCTGCGGC ACGAGCGCTC GCGCACCGGT TCACGCACGG AGGCCGCCTC GTGA
|
|---|
| Protein sequence | MEKRPLNPSS TPSPPPRRPF NEWLDGARDT IPMMIGAAPF GVIFGTLVAG GPLAAWHGTL
MSLAVFAGSA QFIALGLIAG SASFVVVLAT TLIVNLRHLL YSATLAPYVA HLPLRWRATL
GALLTDEVFA VAYSHYRHFP PGAIGPHYFF GSGLAMYLNW QVWTLAGIGF GAAFPGLQSL
GLDFAMAATF IAIVVPQLGK LRYFAAAATA GTLAYFWQGW PYKLGLLGAV AAGVVVGVAL
TLRHERSRTG SRTEAAS
|
|---|
| |