Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0974 |
Symbol | |
ID | 6178657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1064956 |
End bp | 1065732 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680724 |
Product | hypothetical protein |
Protein accession | YP_001807681 |
Protein GI | 172060029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00597505 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGA TCACCCTTTC CCTCAAGGAC GACACGCTTG CGTCCTTGCG CAAGGACTAC GACGCGTTCG TACGCGTATC GCTGAAACTC GACCCGCAGT TCGCGACGCC GTCGTTCGAG GATTTCCTGC GCGCCAAGCT GCTCGACAAC ATGGTGCCGC TGACCGAGCA TGCCGTACAG CGGATGCTCG AAGGCGGCCA GTACGCGTGG GCGAAGCGCA CGCTCGACAA GGAATTCCCG GACGTCGTCG CGATCCTGAT GCGGCAGGCC GGCGAATTCG GCTTCGGCTT CGCGTCGCGC GCCGAATGGA CCCCCGACGA GCTCGCGAAG GCGTGCCGCG ACTGGGCCAA GGCGATCGTC GCCGAAGCGC AGGGCGACGC GTCGCTGGTC GATCCGCTCG CCGCGCAGAT CAAGAGCGCG GTGCACGACA TCCAGGCGCT CGAGGAAATG ATGCAGACGC CCGCGTGGCG GCTCGCGGAA TCGCTGCGCC AGCGCATCTA CGAGGCCAAG CTCGCATGCG AGATGAGCGT CGGCAGCGCC GCGCGCGACA AGCTCGGCGA ATTGCGCGGC CTGCTGCGGC TCGGGCTCGC GCATGGTTCG TTCCAGAAAC AGGAAGCGCA GCAGATCATG GAATACCTGC GGCTCCTGAA GCCCGAGATC TTCATCGAGG AACCGTACGA CGTATTCGCG CGGCTCGCCG CGTGGCTGCG CGGCGTGTTC GCACCGTCCG CCGCACGACC GGCGCACGGG CCGGGGCCGG AACAGCGCCG GCCATGA
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Protein sequence | MGQITLSLKD DTLASLRKDY DAFVRVSLKL DPQFATPSFE DFLRAKLLDN MVPLTEHAVQ RMLEGGQYAW AKRTLDKEFP DVVAILMRQA GEFGFGFASR AEWTPDELAK ACRDWAKAIV AEAQGDASLV DPLAAQIKSA VHDIQALEEM MQTPAWRLAE SLRQRIYEAK LACEMSVGSA ARDKLGELRG LLRLGLAHGS FQKQEAQQIM EYLRLLKPEI FIEEPYDVFA RLAAWLRGVF APSAARPAHG PGPEQRRP
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