Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0969 |
Symbol | |
ID | 6178734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1060268 |
End bp | 1060780 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680719 |
Product | thioesterase superfamily protein |
Protein accession | YP_001807676 |
Protein GI | 172060024 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCAC AGTCCCCCGT ACCCGCCGCC CTGGACCGCA CCGAAACCGT ATTCCGCTTC CTCGCCGAGC CGTCGTCCGT GAACTTTGGC GGCAAGGTGC ACGGCGGCGC GCTGATGAAG TGGATCGACG AGGTCGCGTA TGCGTGCGCG GCAGTCTGGT CGAGCCGCTA TTGCGTGACG GTCAGCGTCG GCAACATCCG CTTCCAGCGT CCGATCCTCG TCGGCAACCT GGTCGAGCTG AAGGCGCGCG TCGTCGCGAC GGGCCGCACC AGCATGCACA TCCATGTGTC CGTGCATGCC GGCGATCCGA AGGGGGGCGT GCTGCGTCAG ACGACCGACT GTCTCGTCGT GTTCGTCGCG GTCGACGAGA ACGGCAACCC GGTGCCGGTG CCACCGTTCG TGCCCGAGAC CGACGAGCAG AAAGTGCTCG CGAAATATGC GGCCGACGTG CGCGCCGCGC TCGACAAGAT CGTCGAGATG AAACCCGAGG AAGTGGCGAA GGGCACCGTC TGA
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Protein sequence | MSPQSPVPAA LDRTETVFRF LAEPSSVNFG GKVHGGALMK WIDEVAYACA AVWSSRYCVT VSVGNIRFQR PILVGNLVEL KARVVATGRT SMHIHVSVHA GDPKGGVLRQ TTDCLVVFVA VDENGNPVPV PPFVPETDEQ KVLAKYAADV RAALDKIVEM KPEEVAKGTV
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