| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0964 |
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| Symbol | |
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| ID | 6179042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1053852 |
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| End bp | 1055249 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680714 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001807671 |
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| Protein GI | 172060019 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCCG AGCAGCGGCA TGTGATCTAT TTCTCGCGCG AACCGAACGA CGCGTTGCGC
GGGCATTTCG ACGAATGCGG ATGGTGCGTC GATCTCGCGG AAAGCGCACG CGACTTGCGG
CGTGTCGTGC AGCACGGCGT GGCATCCGCC GGCCTGCTCG ATTTCTCGCC GGGTTTCAGG
CCCGCGGATC TGCGTGAACT CGAAGCGTGT CTGAGCATCC AGCACATCGG CTGGATCGCG
GCGACCCGGC GTGGCCAGTT GCAGGACGCC ACGTTGCGCC ATCTCATCCG CGACTATTGC
TTCGACTACG TGACGATGCC GTACGAGACG TCACGCATCG TCGAAACCGT CGGCCACGCG
CACGGCATGA TCGCGCTGAC CGACCCGGTG GCGTCGCCGG TCGGCGCCGG GCGCACCGAA
GGCGAGATGG TCGGCACCTG CGATGCGATG CTCGGACTTT TCAGGACGAT CCGGCGCGTC
GCGACCACCG ATGCGCCGGT GTTCATCTCC GGTGAATCGG GTACCGGCAA GGAGCTGACG
GCCGTCGCGA TTCACGAGCG CTCGGCGCGT GCGCACGCGC CGTTCGTCGC GATCAACTGC
GGTGCGATTC CGTCGACGCT GCTGCAAGCC GAGCTGTTCG GCTACGAGCG CGGCGCGTTT
ACGGGCGCGA ACCAGCGCAA GATCGGCCGC GTCGAGGCCG CGAACGGCGG CACGCTGTTT
CTCGACGAAA TCGGCGACCT GCCGCTCGAG AGCCAGGCGA GCCTCCTGCG GTTCCTGCAG
GAAGGCAAGA TCGAGCGGCT CGGCGCGCAT GTATCGGTGC CGGTCGACGT GCGCGTGATC
TGCGCGACGC ATGTGGACAT GGAAACGGCG CTGCGTGAAG GGCGGTTCCG CGAGGATCTG
TTCCATCGCC TGTGCGTGCT GAAGATCGAG GAGCCGCCGC TACGCGCGCG CGGCAAGGAC
ATCGAGGTGC TCGCCCGCCA CATGCTCGAG CGTTTCAAGG GCGATGCGCA TCGTCGGCTG
CGCGGCTTCT CTCCGGACGC GATCGCCGCG CTGTACGGCT ATTCTTGGCC CGGCAACGTG
CGCGAGCTGA TCAACCGTGT GCGCCGCGCG ATCGTGATGT CGGAGGGCCG GATGATTACC
GCGGCCGATC TCGAGCTCCA TGAATTCGCG ATACTGGCGC CCGTCTCGCT TACCGAGGCG
CGGGAGGCGG CCGAGCGGCA GGCGATCGAG CAGGCCCTGC TGCGTCATCG CGGCCGTTTT
GCCGATGCGG CGCGTGAGCT CGGCGTGTCG CGCGTGACGC TGTACAGGTT GATGTGCGCG
CATGGCATGC GCGATCGCGG CGACACGCTG GCAGGGTTTT CGGCGCCGGC GCCGGAGGTT
CCGCGTCACG CTTGCTAA
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| Protein sequence | MGAEQRHVIY FSREPNDALR GHFDECGWCV DLAESARDLR RVVQHGVASA GLLDFSPGFR
PADLRELEAC LSIQHIGWIA ATRRGQLQDA TLRHLIRDYC FDYVTMPYET SRIVETVGHA
HGMIALTDPV ASPVGAGRTE GEMVGTCDAM LGLFRTIRRV ATTDAPVFIS GESGTGKELT
AVAIHERSAR AHAPFVAINC GAIPSTLLQA ELFGYERGAF TGANQRKIGR VEAANGGTLF
LDEIGDLPLE SQASLLRFLQ EGKIERLGAH VSVPVDVRVI CATHVDMETA LREGRFREDL
FHRLCVLKIE EPPLRARGKD IEVLARHMLE RFKGDAHRRL RGFSPDAIAA LYGYSWPGNV
RELINRVRRA IVMSEGRMIT AADLELHEFA ILAPVSLTEA REAAERQAIE QALLRHRGRF
ADAARELGVS RVTLYRLMCA HGMRDRGDTL AGFSAPAPEV PRHAC
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